Protein–RNA interactions for Protein: O88561

Slc27a3, Long-chain fatty acid transport protein 3, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc27a3O88561 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Slc27a3O88561 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Slc27a3O88561 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Slc27a3O88561 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Slc27a3O88561 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Slc27a3O88561 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.35■■■□□ 2.13
Slc27a3O88561 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Slc27a3O88561 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Slc27a3O88561 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Slc27a3O88561 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Slc27a3O88561 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Slc27a3O88561 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Slc27a3O88561 Particl-201ENSMUST00000205370 1560 ntBASIC28.33■■■□□ 2.12
Slc27a3O88561 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
Slc27a3O88561 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
Slc27a3O88561 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Slc27a3O88561 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Slc27a3O88561 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Slc27a3O88561 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Slc27a3O88561 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.29■■■□□ 2.12
Slc27a3O88561 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Slc27a3O88561 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Slc27a3O88561 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
Slc27a3O88561 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Slc27a3O88561 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Slc27a3O88561 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Slc27a3O88561 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Slc27a3O88561 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Slc27a3O88561 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Slc27a3O88561 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Slc27a3O88561 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Slc27a3O88561 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.23■■■□□ 2.11
Slc27a3O88561 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Slc27a3O88561 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Slc27a3O88561 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Slc27a3O88561 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Slc27a3O88561 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Slc27a3O88561 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Slc27a3O88561 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
Slc27a3O88561 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.19■■■□□ 2.1
Slc27a3O88561 Mir6538-201ENSMUST00000183713 110 ntBASIC28.18■■■□□ 2.1
Slc27a3O88561 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Slc27a3O88561 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
Slc27a3O88561 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Slc27a3O88561 Gm11175-201ENSMUST00000116172 543 ntBASIC28.16■■■□□ 2.1
Slc27a3O88561 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Slc27a3O88561 Gm6311-201ENSMUST00000073790 878 ntBASIC28.16■■■□□ 2.1
Slc27a3O88561 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Slc27a3O88561 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
Slc27a3O88561 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Slc27a3O88561 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Slc27a3O88561 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Slc27a3O88561 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.12■■■□□ 2.09
Slc27a3O88561 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Slc27a3O88561 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Slc27a3O88561 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Slc27a3O88561 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Slc27a3O88561 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
Slc27a3O88561 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Slc27a3O88561 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Slc27a3O88561 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.11■■■□□ 2.09
Slc27a3O88561 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Slc27a3O88561 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Slc27a3O88561 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
Slc27a3O88561 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.08■■■□□ 2.09
Slc27a3O88561 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.08■■■□□ 2.09
Slc27a3O88561 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
Slc27a3O88561 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Slc27a3O88561 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Slc27a3O88561 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Slc27a3O88561 Zxda-201ENSMUST00000117281 2621 ntBASIC28.02■■■□□ 2.08
Slc27a3O88561 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Slc27a3O88561 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.02■■■□□ 2.08
Slc27a3O88561 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Slc27a3O88561 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.01■■■□□ 2.07
Slc27a3O88561 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.01■■■□□ 2.07
Slc27a3O88561 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
Slc27a3O88561 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Slc27a3O88561 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Slc27a3O88561 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Slc27a3O88561 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Slc27a3O88561 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.99■■■□□ 2.07
Slc27a3O88561 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Slc27a3O88561 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.96■■■□□ 2.07
Slc27a3O88561 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Slc27a3O88561 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
Slc27a3O88561 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
Slc27a3O88561 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.94■■■□□ 2.06
Slc27a3O88561 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.93■■■□□ 2.06
Slc27a3O88561 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
Slc27a3O88561 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Slc27a3O88561 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Slc27a3O88561 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Slc27a3O88561 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.89■■■□□ 2.06
Slc27a3O88561 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.89■■■□□ 2.06
Slc27a3O88561 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.88■■■□□ 2.05
Slc27a3O88561 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Slc27a3O88561 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Slc27a3O88561 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Slc27a3O88561 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms