Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tspan6O70401 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.67■■□□□ 1.38
Tspan6O70401 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.67■■□□□ 1.38
Tspan6O70401 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tspan6O70401 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tspan6O70401 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Tspan6O70401 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tspan6O70401 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tspan6O70401 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Tspan6O70401 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tspan6O70401 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.65■■□□□ 1.38
Tspan6O70401 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tspan6O70401 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Tspan6O70401 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.64■■□□□ 1.37
Tspan6O70401 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Tspan6O70401 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.64■■□□□ 1.37
Tspan6O70401 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.63■■□□□ 1.37
Tspan6O70401 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.63■■□□□ 1.37
Tspan6O70401 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.62■■□□□ 1.37
Tspan6O70401 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tspan6O70401 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tspan6O70401 Particl-201ENSMUST00000205370 1560 ntBASIC23.61■■□□□ 1.37
Tspan6O70401 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tspan6O70401 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tspan6O70401 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Tspan6O70401 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tspan6O70401 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tspan6O70401 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.56■■□□□ 1.36
Tspan6O70401 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Tspan6O70401 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tspan6O70401 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Tspan6O70401 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tspan6O70401 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tspan6O70401 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tspan6O70401 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Tspan6O70401 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Tspan6O70401 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tspan6O70401 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tspan6O70401 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tspan6O70401 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Tspan6O70401 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Tspan6O70401 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Tspan6O70401 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Tspan6O70401 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Tspan6O70401 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Tspan6O70401 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.48■■□□□ 1.35
Tspan6O70401 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tspan6O70401 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tspan6O70401 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tspan6O70401 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.47■■□□□ 1.35
Tspan6O70401 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Tspan6O70401 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Tspan6O70401 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
Tspan6O70401 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.45■■□□□ 1.35
Tspan6O70401 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Tspan6O70401 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tspan6O70401 Mir6538-201ENSMUST00000183713 110 ntBASIC23.45■■□□□ 1.34
Tspan6O70401 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Tspan6O70401 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Tspan6O70401 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Tspan6O70401 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Tspan6O70401 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tspan6O70401 Zxda-201ENSMUST00000117281 2621 ntBASIC23.43■■□□□ 1.34
Tspan6O70401 Gm6311-201ENSMUST00000073790 878 ntBASIC23.43■■□□□ 1.34
Tspan6O70401 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Tspan6O70401 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Tspan6O70401 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Tspan6O70401 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.4■■□□□ 1.34
Tspan6O70401 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
Tspan6O70401 Gm11175-201ENSMUST00000116172 543 ntBASIC23.38■■□□□ 1.33
Tspan6O70401 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Tspan6O70401 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.37■■□□□ 1.33
Tspan6O70401 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Tspan6O70401 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Tspan6O70401 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Tspan6O70401 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Tspan6O70401 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Tspan6O70401 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Tspan6O70401 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Tspan6O70401 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Tspan6O70401 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tspan6O70401 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tspan6O70401 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Tspan6O70401 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Tspan6O70401 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.32■■□□□ 1.32
Tspan6O70401 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.32■■□□□ 1.32
Tspan6O70401 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Tspan6O70401 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.31■■□□□ 1.32
Tspan6O70401 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tspan6O70401 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.3■■□□□ 1.32
Tspan6O70401 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.3■■□□□ 1.32
Tspan6O70401 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.29■■□□□ 1.32
Tspan6O70401 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tspan6O70401 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Tspan6O70401 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.28■■□□□ 1.32
Tspan6O70401 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tspan6O70401 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Tspan6O70401 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Tspan6O70401 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Tspan6O70401 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms