Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SgceO70258 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SgceO70258 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SgceO70258 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SgceO70258 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SgceO70258 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.16■□□□□ 0.98
SgceO70258 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.16■□□□□ 0.98
SgceO70258 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SgceO70258 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SgceO70258 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SgceO70258 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SgceO70258 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SgceO70258 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SgceO70258 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
SgceO70258 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SgceO70258 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SgceO70258 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SgceO70258 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SgceO70258 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SgceO70258 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SgceO70258 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SgceO70258 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SgceO70258 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SgceO70258 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SgceO70258 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SgceO70258 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
SgceO70258 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SgceO70258 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SgceO70258 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SgceO70258 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SgceO70258 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SgceO70258 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SgceO70258 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SgceO70258 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SgceO70258 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SgceO70258 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SgceO70258 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SgceO70258 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SgceO70258 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SgceO70258 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SgceO70258 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SgceO70258 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SgceO70258 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SgceO70258 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SgceO70258 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SgceO70258 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SgceO70258 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SgceO70258 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SgceO70258 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SgceO70258 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SgceO70258 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SgceO70258 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SgceO70258 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SgceO70258 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.01■□□□□ 0.95
SgceO70258 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SgceO70258 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21■□□□□ 0.95
SgceO70258 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SgceO70258 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21■□□□□ 0.95
SgceO70258 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21■□□□□ 0.95
SgceO70258 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SgceO70258 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SgceO70258 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SgceO70258 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SgceO70258 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SgceO70258 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SgceO70258 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SgceO70258 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SgceO70258 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SgceO70258 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SgceO70258 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SgceO70258 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.96■□□□□ 0.95
SgceO70258 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SgceO70258 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SgceO70258 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SgceO70258 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SgceO70258 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.95■□□□□ 0.94
SgceO70258 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SgceO70258 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SgceO70258 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SgceO70258 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.93■□□□□ 0.94
SgceO70258 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SgceO70258 Gm30023-201ENSMUST00000197970 889 ntBASIC20.92■□□□□ 0.94
SgceO70258 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SgceO70258 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
SgceO70258 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SgceO70258 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SgceO70258 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SgceO70258 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SgceO70258 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SgceO70258 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SgceO70258 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.9■□□□□ 0.94
SgceO70258 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.9■□□□□ 0.94
SgceO70258 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SgceO70258 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SgceO70258 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SgceO70258 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SgceO70258 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SgceO70258 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SgceO70258 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SgceO70258 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms