Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DffbO54788 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DffbO54788 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DffbO54788 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DffbO54788 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DffbO54788 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DffbO54788 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.36■□□□□ 0.85
DffbO54788 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
DffbO54788 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DffbO54788 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
DffbO54788 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DffbO54788 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DffbO54788 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DffbO54788 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DffbO54788 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DffbO54788 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DffbO54788 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DffbO54788 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DffbO54788 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DffbO54788 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DffbO54788 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DffbO54788 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DffbO54788 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
DffbO54788 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DffbO54788 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DffbO54788 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
DffbO54788 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
DffbO54788 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.28■□□□□ 0.84
DffbO54788 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DffbO54788 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.27■□□□□ 0.84
DffbO54788 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
DffbO54788 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DffbO54788 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DffbO54788 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DffbO54788 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
DffbO54788 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.24■□□□□ 0.83
DffbO54788 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
DffbO54788 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DffbO54788 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DffbO54788 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DffbO54788 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DffbO54788 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DffbO54788 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DffbO54788 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DffbO54788 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DffbO54788 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.2■□□□□ 0.82
DffbO54788 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DffbO54788 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DffbO54788 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DffbO54788 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DffbO54788 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DffbO54788 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DffbO54788 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DffbO54788 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DffbO54788 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DffbO54788 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DffbO54788 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.16■□□□□ 0.82
DffbO54788 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
DffbO54788 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DffbO54788 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DffbO54788 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DffbO54788 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DffbO54788 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DffbO54788 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DffbO54788 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DffbO54788 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DffbO54788 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DffbO54788 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DffbO54788 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
DffbO54788 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DffbO54788 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DffbO54788 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DffbO54788 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DffbO54788 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DffbO54788 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
DffbO54788 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.11■□□□□ 0.81
DffbO54788 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DffbO54788 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
DffbO54788 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.1■□□□□ 0.81
DffbO54788 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DffbO54788 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
DffbO54788 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DffbO54788 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
DffbO54788 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
DffbO54788 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DffbO54788 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.07■□□□□ 0.8
DffbO54788 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DffbO54788 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
DffbO54788 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DffbO54788 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
DffbO54788 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DffbO54788 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DffbO54788 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DffbO54788 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DffbO54788 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DffbO54788 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DffbO54788 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
DffbO54788 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.04■□□□□ 0.8
DffbO54788 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DffbO54788 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms