Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.74■□□□□ 0.91
Gfra3O35118 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.73■□□□□ 0.91
Gfra3O35118 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.73■□□□□ 0.91
Gfra3O35118 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gfra3O35118 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gfra3O35118 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gfra3O35118 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gfra3O35118 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.71■□□□□ 0.91
Gfra3O35118 Gm30023-201ENSMUST00000197970 889 ntBASIC20.71■□□□□ 0.91
Gfra3O35118 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Gfra3O35118 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gfra3O35118 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gfra3O35118 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gfra3O35118 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gfra3O35118 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gfra3O35118 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Gfra3O35118 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gfra3O35118 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Gfra3O35118 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Gfra3O35118 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gfra3O35118 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gfra3O35118 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.68■□□□□ 0.9
Gfra3O35118 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.68■□□□□ 0.9
Gfra3O35118 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.68■□□□□ 0.9
Gfra3O35118 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gfra3O35118 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gfra3O35118 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.67■□□□□ 0.9
Gfra3O35118 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.67■□□□□ 0.9
Gfra3O35118 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.67■□□□□ 0.9
Gfra3O35118 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gfra3O35118 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gfra3O35118 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gfra3O35118 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gfra3O35118 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gfra3O35118 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gfra3O35118 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gfra3O35118 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gfra3O35118 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.64■□□□□ 0.89
Gfra3O35118 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Gfra3O35118 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gfra3O35118 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gfra3O35118 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gfra3O35118 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gfra3O35118 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gfra3O35118 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.62■□□□□ 0.89
Gfra3O35118 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Gfra3O35118 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gfra3O35118 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gfra3O35118 Gm7432-201ENSMUST00000210343 879 ntBASIC20.6■□□□□ 0.89
Gfra3O35118 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Gfra3O35118 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Gfra3O35118 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Gfra3O35118 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
Gfra3O35118 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gfra3O35118 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gfra3O35118 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gfra3O35118 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gfra3O35118 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.56■□□□□ 0.88
Gfra3O35118 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gfra3O35118 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gfra3O35118 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gfra3O35118 Amer2-203ENSMUST00000225247 2662 ntBASIC20.54■□□□□ 0.88
Gfra3O35118 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gfra3O35118 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gfra3O35118 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.54■□□□□ 0.88
Gfra3O35118 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.53■□□□□ 0.88
Gfra3O35118 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gfra3O35118 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gfra3O35118 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gfra3O35118 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gfra3O35118 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gfra3O35118 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gfra3O35118 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gfra3O35118 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gfra3O35118 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Gfra3O35118 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
Gfra3O35118 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gfra3O35118 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gfra3O35118 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gfra3O35118 Gm11599-201ENSMUST00000118720 878 ntBASIC20.49■□□□□ 0.87
Gfra3O35118 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.49■□□□□ 0.87
Gfra3O35118 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gfra3O35118 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gfra3O35118 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.48■□□□□ 0.87
Gfra3O35118 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gfra3O35118 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Gfra3O35118 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gfra3O35118 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gfra3O35118 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Gfra3O35118 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gfra3O35118 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Gfra3O35118 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gfra3O35118 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.44■□□□□ 0.86
Gfra3O35118 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gfra3O35118 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gfra3O35118 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gfra3O35118 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Gfra3O35118 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.43■□□□□ 0.86
Gfra3O35118 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.43■□□□□ 0.86
Gfra3O35118 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms