Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Raet1cO08604 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Raet1cO08604 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.31■■□□□ 1
Raet1cO08604 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Raet1cO08604 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Raet1cO08604 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.3■■□□□ 1
Raet1cO08604 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.3■■□□□ 1
Raet1cO08604 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Raet1cO08604 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.3■■□□□ 1
Raet1cO08604 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Raet1cO08604 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Raet1cO08604 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Raet1cO08604 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Raet1cO08604 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Raet1cO08604 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Raet1cO08604 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Raet1cO08604 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.26■□□□□ 0.99
Raet1cO08604 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Raet1cO08604 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Raet1cO08604 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Raet1cO08604 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Raet1cO08604 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Raet1cO08604 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Raet1cO08604 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.24■□□□□ 0.99
Raet1cO08604 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Raet1cO08604 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Raet1cO08604 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Raet1cO08604 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Raet1cO08604 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Raet1cO08604 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Raet1cO08604 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Raet1cO08604 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Raet1cO08604 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Raet1cO08604 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Raet1cO08604 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Raet1cO08604 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Raet1cO08604 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Raet1cO08604 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Raet1cO08604 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Raet1cO08604 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Raet1cO08604 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Raet1cO08604 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Raet1cO08604 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Raet1cO08604 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.16■□□□□ 0.98
Raet1cO08604 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Raet1cO08604 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Raet1cO08604 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Raet1cO08604 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Raet1cO08604 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Raet1cO08604 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Raet1cO08604 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Raet1cO08604 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Raet1cO08604 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Raet1cO08604 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Raet1cO08604 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Raet1cO08604 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Raet1cO08604 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Raet1cO08604 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Raet1cO08604 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Raet1cO08604 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Raet1cO08604 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.12■□□□□ 0.97
Raet1cO08604 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Raet1cO08604 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.12■□□□□ 0.97
Raet1cO08604 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Raet1cO08604 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Raet1cO08604 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Raet1cO08604 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.1■□□□□ 0.97
Raet1cO08604 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Raet1cO08604 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Raet1cO08604 Gm30023-201ENSMUST00000197970 889 ntBASIC21.09■□□□□ 0.97
Raet1cO08604 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Raet1cO08604 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Raet1cO08604 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Raet1cO08604 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.08■□□□□ 0.97
Raet1cO08604 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.08■□□□□ 0.97
Raet1cO08604 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Raet1cO08604 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Raet1cO08604 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Raet1cO08604 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Raet1cO08604 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Raet1cO08604 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.06■□□□□ 0.96
Raet1cO08604 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Raet1cO08604 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Raet1cO08604 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Raet1cO08604 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Raet1cO08604 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Raet1cO08604 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Raet1cO08604 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.05■□□□□ 0.96
Raet1cO08604 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Raet1cO08604 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Raet1cO08604 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Raet1cO08604 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Raet1cO08604 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Raet1cO08604 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Raet1cO08604 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Raet1cO08604 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Raet1cO08604 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.04■□□□□ 0.96
Raet1cO08604 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Raet1cO08604 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Raet1cO08604 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms