Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ptchd4B9EKX1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ptchd4B9EKX1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ptchd4B9EKX1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.23■■□□□ 1.79
Ptchd4B9EKX1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ptchd4B9EKX1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ptchd4B9EKX1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.22■■□□□ 1.79
Ptchd4B9EKX1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.21■■□□□ 1.79
Ptchd4B9EKX1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Ptchd4B9EKX1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ptchd4B9EKX1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.2■■□□□ 1.78
Ptchd4B9EKX1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.2■■□□□ 1.78
Ptchd4B9EKX1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Ptchd4B9EKX1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ptchd4B9EKX1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ptchd4B9EKX1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Ptchd4B9EKX1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ptchd4B9EKX1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ptchd4B9EKX1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ptchd4B9EKX1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.16■■□□□ 1.78
Ptchd4B9EKX1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ptchd4B9EKX1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ptchd4B9EKX1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.15■■□□□ 1.78
Ptchd4B9EKX1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.15■■□□□ 1.78
Ptchd4B9EKX1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ptchd4B9EKX1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.13■■□□□ 1.77
Ptchd4B9EKX1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Ptchd4B9EKX1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ptchd4B9EKX1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.11■■□□□ 1.77
Ptchd4B9EKX1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ptchd4B9EKX1 Particl-201ENSMUST00000205370 1560 ntBASIC26.11■■□□□ 1.77
Ptchd4B9EKX1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ptchd4B9EKX1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Ptchd4B9EKX1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Ptchd4B9EKX1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ptchd4B9EKX1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ptchd4B9EKX1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
Ptchd4B9EKX1 Zxda-201ENSMUST00000117281 2621 ntBASIC26.07■■□□□ 1.76
Ptchd4B9EKX1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.07■■□□□ 1.76
Ptchd4B9EKX1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ptchd4B9EKX1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
Ptchd4B9EKX1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ptchd4B9EKX1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Ptchd4B9EKX1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ptchd4B9EKX1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ptchd4B9EKX1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ptchd4B9EKX1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ptchd4B9EKX1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ptchd4B9EKX1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ptchd4B9EKX1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ptchd4B9EKX1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
Ptchd4B9EKX1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ptchd4B9EKX1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ptchd4B9EKX1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26■■□□□ 1.75
Ptchd4B9EKX1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ptchd4B9EKX1 Gm11175-201ENSMUST00000116172 543 ntBASIC25.99■■□□□ 1.75
Ptchd4B9EKX1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
Ptchd4B9EKX1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ptchd4B9EKX1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ptchd4B9EKX1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.98■■□□□ 1.75
Ptchd4B9EKX1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.98■■□□□ 1.75
Ptchd4B9EKX1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Ptchd4B9EKX1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.97■■□□□ 1.75
Ptchd4B9EKX1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ptchd4B9EKX1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Ptchd4B9EKX1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
Ptchd4B9EKX1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ptchd4B9EKX1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ptchd4B9EKX1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ptchd4B9EKX1 Mir6538-201ENSMUST00000183713 110 ntBASIC25.92■■□□□ 1.74
Ptchd4B9EKX1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ptchd4B9EKX1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ptchd4B9EKX1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ptchd4B9EKX1 Gm6311-201ENSMUST00000073790 878 ntBASIC25.91■■□□□ 1.74
Ptchd4B9EKX1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Ptchd4B9EKX1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.91■■□□□ 1.74
Ptchd4B9EKX1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ptchd4B9EKX1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
Ptchd4B9EKX1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ptchd4B9EKX1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.9■■□□□ 1.74
Ptchd4B9EKX1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ptchd4B9EKX1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Ptchd4B9EKX1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Ptchd4B9EKX1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ptchd4B9EKX1 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.87■■□□□ 1.73
Ptchd4B9EKX1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.87■■□□□ 1.73
Ptchd4B9EKX1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Ptchd4B9EKX1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.84■■□□□ 1.73
Ptchd4B9EKX1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Ptchd4B9EKX1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.83■■□□□ 1.73
Ptchd4B9EKX1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.83■■□□□ 1.72
Ptchd4B9EKX1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Ptchd4B9EKX1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Ptchd4B9EKX1 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.82■■□□□ 1.72
Ptchd4B9EKX1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
Ptchd4B9EKX1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.81■■□□□ 1.72
Ptchd4B9EKX1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.8■■□□□ 1.72
Ptchd4B9EKX1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Ptchd4B9EKX1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ptchd4B9EKX1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms