Protein–RNA interactions for Protein: A0A140T8P2

Igkv6-20, Immunoglobulin kappa variable 6-20 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-20A0A140T8P2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Igkv6-20A0A140T8P2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Igkv6-20A0A140T8P2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.52■■□□□ 1.36
Igkv6-20A0A140T8P2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.52■■□□□ 1.36
Igkv6-20A0A140T8P2 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.52■■□□□ 1.36
Igkv6-20A0A140T8P2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Igkv6-20A0A140T8P2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.52■■□□□ 1.36
Igkv6-20A0A140T8P2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.51■■□□□ 1.35
Igkv6-20A0A140T8P2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Igkv6-20A0A140T8P2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Igkv6-20A0A140T8P2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Igkv6-20A0A140T8P2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Igkv6-20A0A140T8P2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Igkv6-20A0A140T8P2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Igkv6-20A0A140T8P2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.47■■□□□ 1.35
Igkv6-20A0A140T8P2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.47■■□□□ 1.35
Igkv6-20A0A140T8P2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Igkv6-20A0A140T8P2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Igkv6-20A0A140T8P2 Gm11599-201ENSMUST00000118720 878 ntBASIC23.46■■□□□ 1.35
Igkv6-20A0A140T8P2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Igkv6-20A0A140T8P2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Igkv6-20A0A140T8P2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Igkv6-20A0A140T8P2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Igkv6-20A0A140T8P2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Igkv6-20A0A140T8P2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Igkv6-20A0A140T8P2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Igkv6-20A0A140T8P2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.43■■□□□ 1.34
Igkv6-20A0A140T8P2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Igkv6-20A0A140T8P2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Igkv6-20A0A140T8P2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Igkv6-20A0A140T8P2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Igkv6-20A0A140T8P2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.4■■□□□ 1.34
Igkv6-20A0A140T8P2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Igkv6-20A0A140T8P2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Igkv6-20A0A140T8P2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Igkv6-20A0A140T8P2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
Igkv6-20A0A140T8P2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Igkv6-20A0A140T8P2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Igkv6-20A0A140T8P2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.35■■□□□ 1.33
Igkv6-20A0A140T8P2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
Igkv6-20A0A140T8P2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Igkv6-20A0A140T8P2 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.34■■□□□ 1.33
Igkv6-20A0A140T8P2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Igkv6-20A0A140T8P2 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.33■■□□□ 1.33
Igkv6-20A0A140T8P2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Igkv6-20A0A140T8P2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Igkv6-20A0A140T8P2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Igkv6-20A0A140T8P2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Igkv6-20A0A140T8P2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Igkv6-20A0A140T8P2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Igkv6-20A0A140T8P2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Igkv6-20A0A140T8P2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.31■■□□□ 1.32
Igkv6-20A0A140T8P2 Particl-201ENSMUST00000205370 1560 ntBASIC23.31■■□□□ 1.32
Igkv6-20A0A140T8P2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Igkv6-20A0A140T8P2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Igkv6-20A0A140T8P2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.3■■□□□ 1.32
Igkv6-20A0A140T8P2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Igkv6-20A0A140T8P2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
Igkv6-20A0A140T8P2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Igkv6-20A0A140T8P2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Igkv6-20A0A140T8P2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Igkv6-20A0A140T8P2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Igkv6-20A0A140T8P2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Igkv6-20A0A140T8P2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Igkv6-20A0A140T8P2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Igkv6-20A0A140T8P2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
Igkv6-20A0A140T8P2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Igkv6-20A0A140T8P2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Igkv6-20A0A140T8P2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Igkv6-20A0A140T8P2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Igkv6-20A0A140T8P2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.23■■□□□ 1.31
Igkv6-20A0A140T8P2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Igkv6-20A0A140T8P2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Igkv6-20A0A140T8P2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Igkv6-20A0A140T8P2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.2■■□□□ 1.3
Igkv6-20A0A140T8P2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.19■■□□□ 1.3
Igkv6-20A0A140T8P2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.19■■□□□ 1.3
Igkv6-20A0A140T8P2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Igkv6-20A0A140T8P2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Igkv6-20A0A140T8P2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Igkv6-20A0A140T8P2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.18■■□□□ 1.3
Igkv6-20A0A140T8P2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Igkv6-20A0A140T8P2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Igkv6-20A0A140T8P2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Igkv6-20A0A140T8P2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.16■■□□□ 1.3
Igkv6-20A0A140T8P2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Igkv6-20A0A140T8P2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Igkv6-20A0A140T8P2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Igkv6-20A0A140T8P2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
Igkv6-20A0A140T8P2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.14■■□□□ 1.29
Igkv6-20A0A140T8P2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Igkv6-20A0A140T8P2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Igkv6-20A0A140T8P2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Igkv6-20A0A140T8P2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Igkv6-20A0A140T8P2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Igkv6-20A0A140T8P2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.12■■□□□ 1.29
Igkv6-20A0A140T8P2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Igkv6-20A0A140T8P2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Igkv6-20A0A140T8P2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Igkv6-20A0A140T8P2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms