Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Igkv5-39A0A0G2JDV4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.52■■□□□ 1.52
Igkv5-39A0A0G2JDV4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Igkv5-39A0A0G2JDV4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.52■■□□□ 1.52
Igkv5-39A0A0G2JDV4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Igkv5-39A0A0G2JDV4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Igkv5-39A0A0G2JDV4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Igkv5-39A0A0G2JDV4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Igkv5-39A0A0G2JDV4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Igkv5-39A0A0G2JDV4 Gm7432-201ENSMUST00000210343 879 ntBASIC24.48■■□□□ 1.51
Igkv5-39A0A0G2JDV4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Igkv5-39A0A0G2JDV4 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.46■■□□□ 1.51
Igkv5-39A0A0G2JDV4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Igkv5-39A0A0G2JDV4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Igkv5-39A0A0G2JDV4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.45■■□□□ 1.5
Igkv5-39A0A0G2JDV4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Igkv5-39A0A0G2JDV4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Igkv5-39A0A0G2JDV4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Igkv5-39A0A0G2JDV4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Igkv5-39A0A0G2JDV4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.43■■□□□ 1.5
Igkv5-39A0A0G2JDV4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.41■■□□□ 1.5
Igkv5-39A0A0G2JDV4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Igkv5-39A0A0G2JDV4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Igkv5-39A0A0G2JDV4 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.4■■□□□ 1.5
Igkv5-39A0A0G2JDV4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.37■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
Igkv5-39A0A0G2JDV4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.36■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Gm11599-201ENSMUST00000118720 878 ntBASIC24.35■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.35■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Igkv5-39A0A0G2JDV4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.33■■□□□ 1.49
Igkv5-39A0A0G2JDV4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Igkv5-39A0A0G2JDV4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Igkv5-39A0A0G2JDV4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.32■■□□□ 1.48
Igkv5-39A0A0G2JDV4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Igkv5-39A0A0G2JDV4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.31■■□□□ 1.48
Igkv5-39A0A0G2JDV4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Igkv5-39A0A0G2JDV4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Igkv5-39A0A0G2JDV4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.31■■□□□ 1.48
Igkv5-39A0A0G2JDV4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Igkv5-39A0A0G2JDV4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Igkv5-39A0A0G2JDV4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Igkv5-39A0A0G2JDV4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Igkv5-39A0A0G2JDV4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Igkv5-39A0A0G2JDV4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Igkv5-39A0A0G2JDV4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Igkv5-39A0A0G2JDV4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Igkv5-39A0A0G2JDV4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Igkv5-39A0A0G2JDV4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Igkv5-39A0A0G2JDV4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Igkv5-39A0A0G2JDV4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
Igkv5-39A0A0G2JDV4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Igkv5-39A0A0G2JDV4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.23■■□□□ 1.47
Igkv5-39A0A0G2JDV4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Igkv5-39A0A0G2JDV4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Igkv5-39A0A0G2JDV4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Igkv5-39A0A0G2JDV4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Igkv5-39A0A0G2JDV4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Igkv5-39A0A0G2JDV4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Igkv5-39A0A0G2JDV4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Igkv5-39A0A0G2JDV4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Igkv5-39A0A0G2JDV4 Particl-201ENSMUST00000205370 1560 ntBASIC24.2■■□□□ 1.47
Igkv5-39A0A0G2JDV4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Igkv5-39A0A0G2JDV4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.2■■□□□ 1.46
Igkv5-39A0A0G2JDV4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Igkv5-39A0A0G2JDV4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Igkv5-39A0A0G2JDV4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Igkv5-39A0A0G2JDV4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.16■■□□□ 1.46
Igkv5-39A0A0G2JDV4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Igkv5-39A0A0G2JDV4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Igkv5-39A0A0G2JDV4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.15■■□□□ 1.46
Igkv5-39A0A0G2JDV4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Igkv5-39A0A0G2JDV4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Igkv5-39A0A0G2JDV4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Igkv5-39A0A0G2JDV4 Amer2-203ENSMUST00000225247 2662 ntBASIC24.14■■□□□ 1.45
Igkv5-39A0A0G2JDV4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Igkv5-39A0A0G2JDV4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Igkv5-39A0A0G2JDV4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Igkv5-39A0A0G2JDV4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Igkv5-39A0A0G2JDV4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Igkv5-39A0A0G2JDV4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.1■■□□□ 1.45
Igkv5-39A0A0G2JDV4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
Igkv5-39A0A0G2JDV4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Igkv5-39A0A0G2JDV4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
Igkv5-39A0A0G2JDV4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Igkv5-39A0A0G2JDV4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.44
Igkv5-39A0A0G2JDV4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms