Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav4-4-dv10A0A075B651 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trav4-4-dv10A0A075B651 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav4-4-dv10A0A075B651 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav4-4-dv10A0A075B651 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trav4-4-dv10A0A075B651 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav4-4-dv10A0A075B651 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav4-4-dv10A0A075B651 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav4-4-dv10A0A075B651 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trav4-4-dv10A0A075B651 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav4-4-dv10A0A075B651 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav4-4-dv10A0A075B651 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.56■□□□□ 0.56
Trav4-4-dv10A0A075B651 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav4-4-dv10A0A075B651 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav4-4-dv10A0A075B651 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav4-4-dv10A0A075B651 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Trav4-4-dv10A0A075B651 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav4-4-dv10A0A075B651 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav4-4-dv10A0A075B651 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav4-4-dv10A0A075B651 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav4-4-dv10A0A075B651 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav4-4-dv10A0A075B651 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav4-4-dv10A0A075B651 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav4-4-dv10A0A075B651 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav4-4-dv10A0A075B651 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav4-4-dv10A0A075B651 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.53■□□□□ 0.56
Trav4-4-dv10A0A075B651 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav4-4-dv10A0A075B651 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav4-4-dv10A0A075B651 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav4-4-dv10A0A075B651 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav4-4-dv10A0A075B651 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav4-4-dv10A0A075B651 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.52■□□□□ 0.55
Trav4-4-dv10A0A075B651 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav4-4-dv10A0A075B651 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav4-4-dv10A0A075B651 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav4-4-dv10A0A075B651 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav4-4-dv10A0A075B651 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav4-4-dv10A0A075B651 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav4-4-dv10A0A075B651 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav4-4-dv10A0A075B651 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav4-4-dv10A0A075B651 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav4-4-dv10A0A075B651 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav4-4-dv10A0A075B651 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trav4-4-dv10A0A075B651 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav4-4-dv10A0A075B651 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav4-4-dv10A0A075B651 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav4-4-dv10A0A075B651 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trav4-4-dv10A0A075B651 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Trav4-4-dv10A0A075B651 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav4-4-dv10A0A075B651 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav4-4-dv10A0A075B651 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav4-4-dv10A0A075B651 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.45■□□□□ 0.54
Trav4-4-dv10A0A075B651 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav4-4-dv10A0A075B651 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav4-4-dv10A0A075B651 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav4-4-dv10A0A075B651 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav4-4-dv10A0A075B651 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav4-4-dv10A0A075B651 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav4-4-dv10A0A075B651 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav4-4-dv10A0A075B651 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav4-4-dv10A0A075B651 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trav4-4-dv10A0A075B651 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav4-4-dv10A0A075B651 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trav4-4-dv10A0A075B651 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav4-4-dv10A0A075B651 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav4-4-dv10A0A075B651 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Trav4-4-dv10A0A075B651 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav4-4-dv10A0A075B651 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav4-4-dv10A0A075B651 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav4-4-dv10A0A075B651 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav4-4-dv10A0A075B651 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trav4-4-dv10A0A075B651 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav4-4-dv10A0A075B651 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav4-4-dv10A0A075B651 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.37■□□□□ 0.53
Trav4-4-dv10A0A075B651 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav4-4-dv10A0A075B651 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav4-4-dv10A0A075B651 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trav4-4-dv10A0A075B651 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav4-4-dv10A0A075B651 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav4-4-dv10A0A075B651 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trav4-4-dv10A0A075B651 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav4-4-dv10A0A075B651 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav4-4-dv10A0A075B651 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav4-4-dv10A0A075B651 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms