Protein–RNA interactions for Protein: P50112

KNH1, Cell wall synthesis protein KNH1, yeast

Predictions only

Length 268 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
KNH1	P50112	YLR041W	YLR041W	321 nt		-0.09	□□□□□ -2.42
KNH1	P50112	SOV1	YMR066W	2697 nt		-0.1	□□□□□ -2.42
KNH1	P50112	YLL019W-A	YLL019W-A	93 nt		-0.1	□□□□□ -2.43
KNH1	P50112	YDR366C	YDR366C	399 nt		-0.11	□□□□□ -2.43
KNH1	P50112	YJL197C-A	YJL197C-A	282 nt		-0.11	□□□□□ -2.43
KNH1	P50112	YKL100W-A	YKL100W-A	90 nt		-0.11	□□□□□ -2.43
KNH1	P50112	YAL063C-A	YAL063C-A	291 nt		-0.11	□□□□□ -2.43
KNH1	P50112	YLR154W-F	YLR154W-F	141 nt		-0.11	□□□□□ -2.43
KNH1	P50112	snR45	snR45	172 nt		-0.12	□□□□□ -2.43
KNH1	P50112	YPR016W-A	YPR016W-A	261 nt		-0.13	□□□□□ -2.43
KNH1	P50112	YBR072C-A	YBR072C-A	162 nt		-0.13	□□□□□ -2.43
KNH1	P50112	YGR069W	YGR069W	336 nt		-0.14	□□□□□ -2.43
KNH1	P50112	YIL032C	YIL032C	357 nt		-0.15	□□□□□ -2.43
KNH1	P50112	YER053C-A	YER053C-A	114 nt		-0.17	□□□□□ -2.44
KNH1	P50112	YLR222C-A	YLR222C-A	231 nt		-0.17	□□□□□ -2.44
KNH1	P50112	YMR158W-B	YMR158W-B	321 nt		-0.17	□□□□□ -2.44
KNH1	P50112	snR128	snR128	126 nt		-0.17	□□□□□ -2.44
KNH1	P50112	HTL1	YCR020W-B	237 nt		-0.18	□□□□□ -2.44
KNH1	P50112	snR8	snR8	190 nt		-0.19	□□□□□ -2.44
KNH1	P50112	YMR193C-A	YMR193C-A	387 nt		-0.19	□□□□□ -2.44
KNH1	P50112	YOR072W-B	YOR072W-B	162 nt		-0.19	□□□□□ -2.44
KNH1	P50112	YAF9	YNL107W	681 nt		-0.2	□□□□□ -2.44
KNH1	P50112	CSE1	YGL238W	2883 nt		-0.2	□□□□□ -2.44
KNH1	P50112	YDR157W	YDR157W	402 nt		-0.21	□□□□□ -2.44
KNH1	P50112	YNL028W	YNL028W	318 nt		-0.22	□□□□□ -2.44
KNH1	P50112	YBR099C	YBR099C	384 nt		-0.22	□□□□□ -2.44
KNH1	P50112	YDR102C	YDR102C	333 nt		-0.23	□□□□□ -2.45
KNH1	P50112	YDR210W	YDR210W	228 nt		-0.24	□□□□□ -2.45
KNH1	P50112	YOR015W	YOR015W	360 nt		-0.24	□□□□□ -2.45
KNH1	P50112	GLG1	YKR058W	1851 nt		-0.24	□□□□□ -2.45
KNH1	P50112	SDH6	YDR379C-A	240 nt		-0.25	□□□□□ -2.45
KNH1	P50112	YCR038W-A	YCR038W-A	126 nt		-0.26	□□□□□ -2.45
KNH1	P50112	HMRA1	YCR097W	381 nt		-0.26	□□□□□ -2.45
KNH1	P50112	VAR1	Q0140	1197 nt		-0.26	□□□□□ -2.45
KNH1	P50112	YGL149W	YGL149W	306 nt		-0.26	□□□□□ -2.45
KNH1	P50112	SBH2	YER019C-A	267 nt		-0.27	□□□□□ -2.45
KNH1	P50112	YIL002W-A	YIL002W-A	210 nt		-0.27	□□□□□ -2.45
KNH1	P50112	EST1	YLR233C	2100 nt		-0.27	□□□□□ -2.45
KNH1	P50112	APQ12	YIL040W	417 nt		-0.28	□□□□□ -2.45
KNH1	P50112	YLR120W-A	YLR120W-A	102 nt		-0.28	□□□□□ -2.45
KNH1	P50112	snR36	snR36	182 nt		-0.28	□□□□□ -2.45
KNH1	P50112	UTP8	YGR128C	2142 nt		-0.29	□□□□□ -2.46
KNH1	P50112	snR74	snR74	88 nt		-0.29	□□□□□ -2.46
KNH1	P50112	RAD61	YDR014W	1944 nt		-0.29	□□□□□ -2.46
KNH1	P50112	YDR183C-A	YDR183C-A	258 nt		-0.3	□□□□□ -2.46
KNH1	P50112	YPL038W-A	YPL038W-A	192 nt		-0.3	□□□□□ -2.46
KNH1	P50112	TFB5	YDR079C-A	219 nt		-0.31	□□□□□ -2.46
KNH1	P50112	ATP6	Q0085	780 nt		-0.31	□□□□□ -2.46
KNH1	P50112	YDR544C	YDR544C	429 nt		-0.31	□□□□□ -2.46
KNH1	P50112	PRP39	YML046W	1890 nt		-0.31	□□□□□ -2.46
KNH1	P50112	Q0144	Q0144	330 nt		-0.32	□□□□□ -2.46
KNH1	P50112	TAH1	YCR060W	336 nt		-0.33	□□□□□ -2.46
KNH1	P50112	YDR118W-A	YDR118W-A	117 nt		-0.33	□□□□□ -2.46
KNH1	P50112	YPR197C	YPR197C	564 nt		-0.34	□□□□□ -2.46
KNH1	P50112	YGL052W	YGL052W	306 nt		-0.36	□□□□□ -2.47
KNH1	P50112	COG6	YNL041C	2520 nt		-0.37	□□□□□ -2.47
KNH1	P50112	YFL032W	YFL032W	321 nt		-0.37	□□□□□ -2.47
KNH1	P50112	YGR164W	YGR164W	336 nt		-0.37	□□□□□ -2.47
KNH1	P50112	YMR172C-A	YMR172C-A	384 nt		-0.37	□□□□□ -2.47
KNH1	P50112	YPR170W-A	YPR170W-A	186 nt		-0.39	□□□□□ -2.47
KNH1	P50112	SEC10	YLR166C	2616 nt		-0.41	□□□□□ -2.47
KNH1	P50112	YDL240C-A	YDL240C-A	138 nt		-0.43	□□□□□ -2.48
KNH1	P50112	YBL039C-A	YBL039C-A	84 nt		-0.43	□□□□□ -2.48
KNH1	P50112	YDR413C	YDR413C	576 nt		-0.44	□□□□□ -2.48
KNH1	P50112	YIR030W-A	YIR030W-A	384 nt		-0.44	□□□□□ -2.48
KNH1	P50112	YPR012W	YPR012W	255 nt		-0.44	□□□□□ -2.48
KNH1	P50112	YOR008C-A	YOR008C-A	225 nt		-0.46	□□□□□ -2.48
KNH1	P50112	snR46	snR46	197 nt		-0.46	□□□□□ -2.48
KNH1	P50112	YER097W	YER097W	330 nt		-0.47	□□□□□ -2.48
KNH1	P50112	RPL39	YJL189W	156 nt		-0.47	□□□□□ -2.48
KNH1	P50112	YML099W-A	YML099W-A	330 nt		-0.47	□□□□□ -2.48
KNH1	P50112	YOR314W-A	YOR314W-A	111 nt		-0.47	□□□□□ -2.48
KNH1	P50112	YFL019C	YFL019C	354 nt		-0.48	□□□□□ -2.49
KNH1	P50112	YGL041C	YGL041C	204 nt		-0.49	□□□□□ -2.49
KNH1	P50112	YIL071W-A	YIL071W-A	477 nt		-0.49	□□□□□ -2.49
KNH1	P50112	YKL118W	YKL118W	312 nt		-0.49	□□□□□ -2.49
KNH1	P50112	YNL067W-B	YNL067W-B	141 nt		-0.49	□□□□□ -2.49
KNH1	P50112	YBR182C-A	YBR182C-A	195 nt		-0.49	□□□□□ -2.49
KNH1	P50112	YGL182C	YGL182C	324 nt		-0.5	□□□□□ -2.49
KNH1	P50112	YDL007C-A	YDL007C-A	258 nt		-0.53	□□□□□ -2.49
KNH1	P50112	URB1	YKL014C	5295 nt		-0.53	□□□□□ -2.49
KNH1	P50112	YML100W-A	YML100W-A	174 nt		-0.54	□□□□□ -2.5
KNH1	P50112	YNL277W-A	YNL277W-A	189 nt		-0.54	□□□□□ -2.5
KNH1	P50112	tF(GAA)Q	tF(GAA)Q	75 nt		-0.56	□□□□□ -2.5
KNH1	P50112	GIM4	YEL003W	336 nt		-0.56	□□□□□ -2.5
KNH1	P50112	RPM2	YML091C	3609 nt		-0.56	□□□□□ -2.5
KNH1	P50112	YPL060C-A	YPL060C-A	3315 nt		-0.57	□□□□□ -2.5
KNH1	P50112	YEL014C	YEL014C	306 nt		-0.57	□□□□□ -2.5
KNH1	P50112	YJL077W-A	YJL077W-A	87 nt		-0.57	□□□□□ -2.5
KNH1	P50112	PAU9	YBL108C-A	129 nt		-0.57	□□□□□ -2.5
KNH1	P50112	YPR010C-A	YPR010C-A	219 nt		-0.57	□□□□□ -2.5
KNH1	P50112	YBR131C-A	YBR131C-A	90 nt		-0.58	□□□□□ -2.5
KNH1	P50112	tA(UGC)Q	tA(UGC)Q	76 nt		-0.59	□□□□□ -2.5
KNH1	P50112	snR33	snR33	183 nt		-0.59	□□□□□ -2.5
KNH1	P50112	tQ(UUG)Q	tQ(UUG)Q	76 nt		-0.61	□□□□□ -2.51
KNH1	P50112	YJL182C	YJL182C	318 nt		-0.61	□□□□□ -2.51
KNH1	P50112	YER181C	YER181C	324 nt		-0.62	□□□□□ -2.51
KNH1	P50112	YOR381W-A	YOR381W-A	168 nt		-0.62	□□□□□ -2.51
KNH1	P50112	snR55	snR55	98 nt		-0.64	□□□□□ -2.51
KNH1	P50112	snR69	snR69	101 nt		-0.64	□□□□□ -2.51

Retrieved 100 of 7,029 protein–RNA pairs in 52.3 ms