Protein–RNA interactions for Protein: P38805

RPF1, Ribosome production factor 1, yeastyeast

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPF1P38805 YJL197C-AYJL197C-A 282 nt-0.06□□□□□ -2.42
RPF1P38805 YLR041WYLR041W 321 nt-0.06□□□□□ -2.42
RPF1P38805 YLR222C-AYLR222C-A 231 nt-0.06□□□□□ -2.42
RPF1P38805 YEL073CYEL073C 324 nt-0.07□□□□□ -2.42
RPF1P38805 YKL100W-AYKL100W-A 90 nt-0.07□□□□□ -2.42
RPF1P38805 YDR366CYDR366C 399 nt-0.08□□□□□ -2.42
RPF1P38805 QCR9YGR183C 201 nt-0.08□□□□□ -2.42
RPF1P38805 YLR232WYLR232W 348 nt-0.08□□□□□ -2.42
RPF1P38805 YPR016W-AYPR016W-A 261 nt-0.08□□□□□ -2.42
RPF1P38805 YIL032CYIL032C 357 nt-0.1□□□□□ -2.43
RPF1P38805 YBR072C-AYBR072C-A 162 nt-0.11□□□□□ -2.43
RPF1P38805 SOV1YMR066W 2697 nt-0.11□□□□□ -2.43
RPF1P38805 YDR157WYDR157W 402 nt-0.12□□□□□ -2.43
RPF1P38805 YGR069WYGR069W 336 nt-0.12□□□□□ -2.43
RPF1P38805 HTL1YCR020W-B 237 nt-0.13□□□□□ -2.43
RPF1P38805 snR45snR45 172 nt-0.13□□□□□ -2.43
RPF1P38805 YER053C-AYER053C-A 114 nt-0.15□□□□□ -2.43
RPF1P38805 YAF9YNL107W 681 nt-0.15□□□□□ -2.43
RPF1P38805 YOR072W-BYOR072W-B 162 nt-0.15□□□□□ -2.43
RPF1P38805 YDR102CYDR102C 333 nt-0.17□□□□□ -2.44
RPF1P38805 VAR1Q0140 1197 nt-0.17□□□□□ -2.44
RPF1P38805 YMR158W-BYMR158W-B 321 nt-0.17□□□□□ -2.44
RPF1P38805 YMR193C-AYMR193C-A 387 nt-0.17□□□□□ -2.44
RPF1P38805 YNL028WYNL028W 318 nt-0.17□□□□□ -2.44
RPF1P38805 Q0144Q0144 330 nt-0.18□□□□□ -2.44
RPF1P38805 CSE1YGL238W 2883 nt-0.19□□□□□ -2.44
RPF1P38805 snR128snR128 126 nt-0.19□□□□□ -2.44
RPF1P38805 snR8snR8 190 nt-0.21□□□□□ -2.44
RPF1P38805 YGL149WYGL149W 306 nt-0.21□□□□□ -2.44
RPF1P38805 YOR015WYOR015W 360 nt-0.21□□□□□ -2.44
RPF1P38805 YDR210WYDR210W 228 nt-0.22□□□□□ -2.44
RPF1P38805 YBR099CYBR099C 384 nt-0.22□□□□□ -2.44
RPF1P38805 snR36snR36 182 nt-0.23□□□□□ -2.45
RPF1P38805 GLG1YKR058W 1851 nt-0.24□□□□□ -2.45
RPF1P38805 YCR038W-AYCR038W-A 126 nt-0.24□□□□□ -2.45
RPF1P38805 YPL038W-AYPL038W-A 192 nt-0.24□□□□□ -2.45
RPF1P38805 YDR183C-AYDR183C-A 258 nt-0.25□□□□□ -2.45
RPF1P38805 SDH6YDR379C-A 240 nt-0.25□□□□□ -2.45
RPF1P38805 HMRA1YCR097W 381 nt-0.26□□□□□ -2.45
RPF1P38805 YIL002W-AYIL002W-A 210 nt-0.26□□□□□ -2.45
RPF1P38805 YLR120W-AYLR120W-A 102 nt-0.26□□□□□ -2.45
RPF1P38805 UTP8YGR128C 2142 nt-0.26□□□□□ -2.45
RPF1P38805 YDR118W-AYDR118W-A 117 nt-0.27□□□□□ -2.45
RPF1P38805 snR74snR74 88 nt-0.28□□□□□ -2.45
RPF1P38805 ATP6Q0085 780 nt-0.28□□□□□ -2.45
RPF1P38805 APQ12YIL040W 417 nt-0.28□□□□□ -2.45
RPF1P38805 YPR197CYPR197C 564 nt-0.28□□□□□ -2.45
RPF1P38805 EST1YLR233C 2100 nt-0.28□□□□□ -2.45
RPF1P38805 RAD61YDR014W 1944 nt-0.3□□□□□ -2.46
RPF1P38805 YDR544CYDR544C 429 nt-0.31□□□□□ -2.46
RPF1P38805 YPR170W-AYPR170W-A 186 nt-0.31□□□□□ -2.46
RPF1P38805 PRP39YML046W 1890 nt-0.31□□□□□ -2.46
RPF1P38805 TFB5YDR079C-A 219 nt-0.32□□□□□ -2.46
RPF1P38805 YFL032WYFL032W 321 nt-0.32□□□□□ -2.46
RPF1P38805 TAH1YCR060W 336 nt-0.34□□□□□ -2.46
RPF1P38805 SBH2YER019C-A 267 nt-0.34□□□□□ -2.46
RPF1P38805 YGL052WYGL052W 306 nt-0.34□□□□□ -2.46
RPF1P38805 YMR172C-AYMR172C-A 384 nt-0.36□□□□□ -2.47
RPF1P38805 COG6YNL041C 2520 nt-0.38□□□□□ -2.47
RPF1P38805 YDL240C-AYDL240C-A 138 nt-0.38□□□□□ -2.47
RPF1P38805 YPR012WYPR012W 255 nt-0.38□□□□□ -2.47
RPF1P38805 YDR413CYDR413C 576 nt-0.4□□□□□ -2.47
RPF1P38805 YFL019CYFL019C 354 nt-0.41□□□□□ -2.48
RPF1P38805 YGR164WYGR164W 336 nt-0.41□□□□□ -2.48
RPF1P38805 RPL39YJL189W 156 nt-0.43□□□□□ -2.48
RPF1P38805 YER097WYER097W 330 nt-0.44□□□□□ -2.48
RPF1P38805 YBL039C-AYBL039C-A 84 nt-0.44□□□□□ -2.48
RPF1P38805 YOR008C-AYOR008C-A 225 nt-0.44□□□□□ -2.48
RPF1P38805 YIR030W-AYIR030W-A 384 nt-0.45□□□□□ -2.48
RPF1P38805 YKL118WYKL118W 312 nt-0.45□□□□□ -2.48
RPF1P38805 snR46snR46 197 nt-0.45□□□□□ -2.48
RPF1P38805 SEC10YLR166C 2616 nt-0.47□□□□□ -2.48
RPF1P38805 YGL041CYGL041C 204 nt-0.49□□□□□ -2.49
RPF1P38805 YBR182C-AYBR182C-A 195 nt-0.49□□□□□ -2.49
RPF1P38805 YML099W-AYML099W-A 330 nt-0.5□□□□□ -2.49
RPF1P38805 YOR314W-AYOR314W-A 111 nt-0.5□□□□□ -2.49
RPF1P38805 YGL182CYGL182C 324 nt-0.52□□□□□ -2.49
RPF1P38805 GIM4YEL003W 336 nt-0.53□□□□□ -2.49
RPF1P38805 YNL277W-AYNL277W-A 189 nt-0.53□□□□□ -2.49
RPF1P38805 YNL067W-BYNL067W-B 141 nt-0.54□□□□□ -2.5
RPF1P38805 YIL071W-AYIL071W-A 477 nt-0.55□□□□□ -2.5
RPF1P38805 tF(GAA)QtF(GAA)Q 75 nt-0.58□□□□□ -2.5
RPF1P38805 YEL014CYEL014C 306 nt-0.59□□□□□ -2.5
RPF1P38805 YPR010C-AYPR010C-A 219 nt-0.59□□□□□ -2.5
RPF1P38805 URB1YKL014C 5295 nt-0.59□□□□□ -2.5
RPF1P38805 YDL007C-AYDL007C-A 258 nt-0.6□□□□□ -2.51
RPF1P38805 YBR131C-AYBR131C-A 90 nt-0.6□□□□□ -2.51
RPF1P38805 YJL077W-AYJL077W-A 87 nt-0.61□□□□□ -2.51
RPF1P38805 YML100W-AYML100W-A 174 nt-0.61□□□□□ -2.51
RPF1P38805 YER181CYER181C 324 nt-0.62□□□□□ -2.51
RPF1P38805 RPM2YML091C 3609 nt-0.64□□□□□ -2.51
RPF1P38805 snR55snR55 98 nt-0.64□□□□□ -2.51
RPF1P38805 YJL182CYJL182C 318 nt-0.64□□□□□ -2.51
RPF1P38805 tQ(UUG)QtQ(UUG)Q 76 nt-0.65□□□□□ -2.51
RPF1P38805 PAU9YBL108C-A 129 nt-0.65□□□□□ -2.51
RPF1P38805 YOR381W-AYOR381W-A 168 nt-0.65□□□□□ -2.51
RPF1P38805 YJL113WYJL113W 4647 nt-0.66□□□□□ -2.52
RPF1P38805 tA(UGC)QtA(UGC)Q 76 nt-0.67□□□□□ -2.52
RPF1P38805 tM(CAU)Q2tM(CAU)Q2 78 nt-0.67□□□□□ -2.52
RPF1P38805 YPL060C-AYPL060C-A 3315 nt-0.67□□□□□ -2.52
Retrieved 100 of 7,029 protein–RNA pairs in 40.9 ms