Protein–RNA interactions for Protein: P0CX40

RPS8B, 40S ribosomal protein S8-B, yeastyeast

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS8BP0CX40 YML002WYML002W 2214 nt0.85□□□□□ -2.27
RPS8BP0CX40 COX5BYIL111W 456 nt0.85□□□□□ -2.27
RPS8BP0CX40 YIL134C-AYIL134C-A 204 nt0.85□□□□□ -2.27
RPS8BP0CX40 YOL014WYOL014W 375 nt0.85□□□□□ -2.27
RPS8BP0CX40 EMT1tM(CAU)D 73 nt0.84□□□□□ -2.27
RPS8BP0CX40 EMT5tM(CAU)J1 73 nt0.84□□□□□ -2.27
RPS8BP0CX40 EMT3tM(CAU)J2 73 nt0.84□□□□□ -2.27
RPS8BP0CX40 EMT4tM(CAU)M 73 nt0.84□□□□□ -2.27
RPS8BP0CX40 EMT2tM(CAU)O2 73 nt0.84□□□□□ -2.27
RPS8BP0CX40 UTP8YGR128C 2142 nt0.84□□□□□ -2.27
RPS8BP0CX40 YIL002W-AYIL002W-A 210 nt0.84□□□□□ -2.27
RPS8BP0CX40 snR52snR52 92 nt0.84□□□□□ -2.27
RPS8BP0CX40 SEC8YPR055W 3198 nt0.84□□□□□ -2.28
RPS8BP0CX40 HAL9YOL089C 3093 nt0.83□□□□□ -2.28
RPS8BP0CX40 THO2YNL139C 4794 nt0.83□□□□□ -2.28
RPS8BP0CX40 YMR160WYMR160W 2451 nt0.82□□□□□ -2.28
RPS8BP0CX40 PMP1YCR024C-A 123 nt0.82□□□□□ -2.28
RPS8BP0CX40 YER053C-AYER053C-A 114 nt0.82□□□□□ -2.28
RPS8BP0CX40 YLR342W-AYLR342W-A 174 nt0.82□□□□□ -2.28
RPS8BP0CX40 snR46snR46 197 nt0.82□□□□□ -2.28
RPS8BP0CX40 BFR2YDR299W 1605 nt0.82□□□□□ -2.28
RPS8BP0CX40 KAP120YPL125W 3099 nt0.81□□□□□ -2.28
RPS8BP0CX40 SCC2YDR180W 4482 nt0.81□□□□□ -2.28
RPS8BP0CX40 ASE1YOR058C 2658 nt0.81□□□□□ -2.28
RPS8BP0CX40 YEL073CYEL073C 324 nt0.8□□□□□ -2.28
RPS8BP0CX40 FYV10YIL097W 1551 nt0.79□□□□□ -2.28
RPS8BP0CX40 YJL182CYJL182C 318 nt0.79□□□□□ -2.28
RPS8BP0CX40 YLR399W-AYLR399W-A 105 nt0.79□□□□□ -2.28
RPS8BP0CX40 PRP5YBR237W 2550 nt0.78□□□□□ -2.28
RPS8BP0CX40 BEM2YER155C 6504 nt0.78□□□□□ -2.28
RPS8BP0CX40 YPR160W-AYPR160W-A 81 nt0.78□□□□□ -2.28
RPS8BP0CX40 PRP42YDR235W 1635 nt0.78□□□□□ -2.29
RPS8BP0CX40 YJL150WYJL150W 303 nt0.77□□□□□ -2.29
RPS8BP0CX40 YPR117WYPR117W 7470 nt0.76□□□□□ -2.29
RPS8BP0CX40 TRS65YGR166W 1683 nt0.75□□□□□ -2.29
RPS8BP0CX40 BEM3YPL115C 3387 nt0.74□□□□□ -2.29
RPS8BP0CX40 YGR151CYGR151C 336 nt0.74□□□□□ -2.29
RPS8BP0CX40 YLR041WYLR041W 321 nt0.74□□□□□ -2.29
RPS8BP0CX40 YLR466C-BYLR466C-B 117 nt0.74□□□□□ -2.29
RPS8BP0CX40 YNL198CYNL198C 303 nt0.74□□□□□ -2.29
RPS8BP0CX40 YIL142C-AYIL142C-A 333 nt0.73□□□□□ -2.29
RPS8BP0CX40 PRP39YML046W 1890 nt0.72□□□□□ -2.29
RPS8BP0CX40 tN(GUU)QtN(GUU)Q 71 nt0.71□□□□□ -2.3
RPS8BP0CX40 YKL145W-AYKL145W-A 93 nt0.71□□□□□ -2.3
RPS8BP0CX40 YLR232WYLR232W 348 nt0.71□□□□□ -2.3
RPS8BP0CX40 RKR1YMR247C 4689 nt0.71□□□□□ -2.3
RPS8BP0CX40 Q0032Q0032 291 nt0.7□□□□□ -2.3
RPS8BP0CX40 YHR131W-AYHR131W-A 246 nt0.7□□□□□ -2.3
RPS8BP0CX40 CHS6YJL099W 2241 nt0.69□□□□□ -2.3
RPS8BP0CX40 FMP27YLR454W 7887 nt0.69□□□□□ -2.3
RPS8BP0CX40 TAH1YCR060W 336 nt0.69□□□□□ -2.3
RPS8BP0CX40 SNU13YEL026W 381 nt0.68□□□□□ -2.3
RPS8BP0CX40 YGL182CYGL182C 324 nt0.68□□□□□ -2.3
RPS8BP0CX40 YOR381W-AYOR381W-A 168 nt0.68□□□□□ -2.3
RPS8BP0CX40 YSP1YHR155W 3687 nt0.67□□□□□ -2.3
RPS8BP0CX40 AI1Q0050 2505 nt0.67□□□□□ -2.3
RPS8BP0CX40 OST4YDL232W 111 nt0.67□□□□□ -2.3
RPS8BP0CX40 YGL007C-AYGL007C-A 87 nt0.66□□□□□ -2.3
RPS8BP0CX40 YBL039C-AYBL039C-A 84 nt0.66□□□□□ -2.3
RPS8BP0CX40 SEC1YDR164C 2175 nt0.64□□□□□ -2.31
RPS8BP0CX40 YJL127W-AYJL127W-A 117 nt0.64□□□□□ -2.31
RPS8BP0CX40 YNL338WYNL338W 159 nt0.64□□□□□ -2.31
RPS8BP0CX40 IQG1YPL242C 4488 nt0.64□□□□□ -2.31
RPS8BP0CX40 YHL015W-AYHL015W-A 84 nt0.63□□□□□ -2.31
RPS8BP0CX40 ULP2YIL031W 3105 nt0.63□□□□□ -2.31
RPS8BP0CX40 YDR544CYDR544C 429 nt0.62□□□□□ -2.31
RPS8BP0CX40 YOR170WYOR170W 306 nt0.62□□□□□ -2.31
RPS8BP0CX40 BUL2YML111W 2763 nt0.6□□□□□ -2.31
RPS8BP0CX40 LTE1YAL024C 4308 nt0.6□□□□□ -2.31
RPS8BP0CX40 YOR225WYOR225W 330 nt0.59□□□□□ -2.31
RPS8BP0CX40 YBR072C-AYBR072C-A 162 nt0.59□□□□□ -2.31
RPS8BP0CX40 NNF2YGR089W 2811 nt0.59□□□□□ -2.32
RPS8BP0CX40 YOR102WYOR102W 351 nt0.58□□□□□ -2.32
RPS8BP0CX40 PET111YMR257C 2403 nt0.58□□□□□ -2.32
RPS8BP0CX40 YLL006W-AYLL006W-A 177 nt0.57□□□□□ -2.32
RPS8BP0CX40 snR48snR48 113 nt0.57□□□□□ -2.32
RPS8BP0CX40 COG6YNL041C 2520 nt0.56□□□□□ -2.32
RPS8BP0CX40 tM(CAU)Q2tM(CAU)Q2 78 nt0.56□□□□□ -2.32
RPS8BP0CX40 YPR159C-AYPR159C-A 102 nt0.56□□□□□ -2.32
RPS8BP0CX40 GLG1YKR058W 1851 nt0.55□□□□□ -2.32
RPS8BP0CX40 YMR272W-AYMR272W-A 114 nt0.55□□□□□ -2.32
RPS8BP0CX40 YOR192C-BYOR192C-B 5313 nt0.54□□□□□ -2.32
RPS8BP0CX40 SDH6YDR379C-A 240 nt0.54□□□□□ -2.32
RPS8BP0CX40 YOR314W-AYOR314W-A 111 nt0.54□□□□□ -2.32
RPS8BP0CX40 YOR329W-AYOR329W-A 210 nt0.53□□□□□ -2.32
RPS8BP0CX40 tT(AGU)BtT(AGU)B 73 nt0.52□□□□□ -2.33
RPS8BP0CX40 tT(AGU)CtT(AGU)C 73 nt0.52□□□□□ -2.33
RPS8BP0CX40 tT(AGU)DtT(AGU)D 73 nt0.52□□□□□ -2.33
RPS8BP0CX40 tT(AGU)HtT(AGU)H 73 nt0.52□□□□□ -2.33
RPS8BP0CX40 tT(AGU)I1tT(AGU)I1 73 nt0.52□□□□□ -2.33
RPS8BP0CX40 tT(AGU)I2tT(AGU)I2 73 nt0.52□□□□□ -2.33
RPS8BP0CX40 tT(AGU)JtT(AGU)J 73 nt0.52□□□□□ -2.33
RPS8BP0CX40 tT(AGU)N1tT(AGU)N1 73 nt0.52□□□□□ -2.33
RPS8BP0CX40 tT(AGU)N2tT(AGU)N2 73 nt0.52□□□□□ -2.33
RPS8BP0CX40 tT(AGU)O1tT(AGU)O1 73 nt0.52□□□□□ -2.33
RPS8BP0CX40 tT(AGU)O2tT(AGU)O2 73 nt0.52□□□□□ -2.33
RPS8BP0CX40 YLR294CYLR294C 330 nt0.52□□□□□ -2.33
RPS8BP0CX40 UTP10YJL109C 5310 nt0.52□□□□□ -2.33
RPS8BP0CX40 YBL100W-BYBL100W-B 5313 nt0.51□□□□□ -2.33
RPS8BP0CX40 CSE1YGL238W 2883 nt0.51□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 60.8 ms