Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 IES4YOR189W 351 nt0.91□□□□□ -2.26
RPN9Q04062 VIK1YPL253C 1944 nt0.91□□□□□ -2.26
RPN9Q04062 ISD11YER048W-A 285 nt0.9□□□□□ -2.27
RPN9Q04062 YER097WYER097W 330 nt0.9□□□□□ -2.27
RPN9Q04062 CMC4YMR194C-B 222 nt0.9□□□□□ -2.27
RPN9Q04062 YMR321CYMR321C 318 nt0.9□□□□□ -2.27
RPN9Q04062 YPL044CYPL044C 549 nt0.9□□□□□ -2.27
RPN9Q04062 ALG13YGL047W 609 nt0.89□□□□□ -2.27
RPN9Q04062 RPS27BYHR021C 249 nt0.89□□□□□ -2.27
RPN9Q04062 PAM16YJL104W 450 nt0.89□□□□□ -2.27
RPN9Q04062 PAU24YBR301W 363 nt0.89□□□□□ -2.27
RPN9Q04062 YDL073WYDL073W 2955 nt0.88□□□□□ -2.27
RPN9Q04062 RKR1YMR247C 4689 nt0.88□□□□□ -2.27
RPN9Q04062 YNL211CYNL211C 261 nt0.88□□□□□ -2.27
RPN9Q04062 YOR218CYOR218C 420 nt0.88□□□□□ -2.27
RPN9Q04062 BFR2YDR299W 1605 nt0.88□□□□□ -2.27
RPN9Q04062 YPR117WYPR117W 7470 nt0.88□□□□□ -2.27
RPN9Q04062 HUG1YML058W-A 207 nt0.87□□□□□ -2.27
RPN9Q04062 NOP9YJL010C 2001 nt0.87□□□□□ -2.27
RPN9Q04062 CSE2YNR010W 450 nt0.86□□□□□ -2.27
RPN9Q04062 YOR282WYOR282W 321 nt0.86□□□□□ -2.27
RPN9Q04062 STE5YDR103W 2754 nt0.85□□□□□ -2.27
RPN9Q04062 DOP1YDR141C 5097 nt0.84□□□□□ -2.27
RPN9Q04062 PAA1YDR071C 576 nt0.84□□□□□ -2.27
RPN9Q04062 RPL39YJL189W 156 nt0.84□□□□□ -2.27
RPN9Q04062 YFR012W-AYFR012W-A 87 nt0.83□□□□□ -2.28
RPN9Q04062 PRP16YKR086W 3216 nt0.81□□□□□ -2.28
RPN9Q04062 PMP1YCR024C-A 123 nt0.81□□□□□ -2.28
RPN9Q04062 YDR354C-AYDR354C-A 144 nt0.8□□□□□ -2.28
RPN9Q04062 RPL26BYGR034W 384 nt0.8□□□□□ -2.28
RPN9Q04062 YNL028WYNL028W 318 nt0.8□□□□□ -2.28
RPN9Q04062 YHR063W-AYHR063W-A 336 nt0.79□□□□□ -2.28
RPN9Q04062 SEC1YDR164C 2175 nt0.78□□□□□ -2.28
RPN9Q04062 NPR2YEL062W 1848 nt0.77□□□□□ -2.29
RPN9Q04062 RAD61YDR014W 1944 nt0.77□□□□□ -2.29
RPN9Q04062 UBP3YER151C 2739 nt0.76□□□□□ -2.29
RPN9Q04062 ASE1YOR058C 2658 nt0.76□□□□□ -2.29
RPN9Q04062 YCR018C-AYCR018C-A 255 nt0.76□□□□□ -2.29
RPN9Q04062 YDL185C-AYDL185C-A 228 nt0.76□□□□□ -2.29
RPN9Q04062 YAL067W-AYAL067W-A 228 nt0.76□□□□□ -2.29
RPN9Q04062 Q0142Q0142 177 nt0.75□□□□□ -2.29
RPN9Q04062 YMR031W-AYMR031W-A 327 nt0.75□□□□□ -2.29
RPN9Q04062 YOR015WYOR015W 360 nt0.75□□□□□ -2.29
RPN9Q04062 RPS30BYOR182C 192 nt0.75□□□□□ -2.29
RPN9Q04062 YIL142C-AYIL142C-A 333 nt0.74□□□□□ -2.29
RPN9Q04062 YGR069WYGR069W 336 nt0.73□□□□□ -2.29
RPN9Q04062 YJL026C-AYJL026C-A 222 nt0.73□□□□□ -2.29
RPN9Q04062 YJL197C-AYJL197C-A 282 nt0.73□□□□□ -2.29
RPN9Q04062 CHS6YJL099W 2241 nt0.73□□□□□ -2.29
RPN9Q04062 YLL019W-AYLL019W-A 93 nt0.72□□□□□ -2.29
RPN9Q04062 YLR120W-AYLR120W-A 102 nt0.72□□□□□ -2.29
RPN9Q04062 YML002WYML002W 2214 nt0.71□□□□□ -2.3
RPN9Q04062 YNL277W-AYNL277W-A 189 nt0.7□□□□□ -2.3
RPN9Q04062 snR190snR190 190 nt0.7□□□□□ -2.3
RPN9Q04062 SEC8YPR055W 3198 nt0.69□□□□□ -2.3
RPN9Q04062 YPR092WYPR092W 306 nt0.69□□□□□ -2.3
RPN9Q04062 YPR159C-AYPR159C-A 102 nt0.69□□□□□ -2.3
RPN9Q04062 YGL052WYGL052W 306 nt0.68□□□□□ -2.3
RPN9Q04062 YMR307C-AYMR307C-A 195 nt0.68□□□□□ -2.3
RPN9Q04062 YOR072W-BYOR072W-B 162 nt0.68□□□□□ -2.3
RPN9Q04062 YPR010C-AYPR010C-A 219 nt0.68□□□□□ -2.3
RPN9Q04062 YPR160W-AYPR160W-A 81 nt0.68□□□□□ -2.3
RPN9Q04062 COY1YKL179C 2040 nt0.67□□□□□ -2.3
RPN9Q04062 YEL020C-BYEL020C-B 198 nt0.67□□□□□ -2.3
RPN9Q04062 YOR008C-AYOR008C-A 225 nt0.67□□□□□ -2.3
RPN9Q04062 tT(AGU)BtT(AGU)B 73 nt0.66□□□□□ -2.3
RPN9Q04062 tT(AGU)CtT(AGU)C 73 nt0.66□□□□□ -2.3
RPN9Q04062 tT(AGU)DtT(AGU)D 73 nt0.66□□□□□ -2.3
RPN9Q04062 tT(AGU)HtT(AGU)H 73 nt0.66□□□□□ -2.3
RPN9Q04062 tT(AGU)I1tT(AGU)I1 73 nt0.66□□□□□ -2.3
RPN9Q04062 tT(AGU)I2tT(AGU)I2 73 nt0.66□□□□□ -2.3
RPN9Q04062 tT(AGU)JtT(AGU)J 73 nt0.66□□□□□ -2.3
RPN9Q04062 tT(AGU)N1tT(AGU)N1 73 nt0.66□□□□□ -2.3
RPN9Q04062 tT(AGU)N2tT(AGU)N2 73 nt0.66□□□□□ -2.3
RPN9Q04062 tT(AGU)O1tT(AGU)O1 73 nt0.66□□□□□ -2.3
RPN9Q04062 tT(AGU)O2tT(AGU)O2 73 nt0.66□□□□□ -2.3
RPN9Q04062 COX5BYIL111W 456 nt0.66□□□□□ -2.3
RPN9Q04062 FYV10YIL097W 1551 nt0.66□□□□□ -2.3
RPN9Q04062 snR65snR65 100 nt0.65□□□□□ -2.31
RPN9Q04062 snR74snR74 88 nt0.65□□□□□ -2.31
RPN9Q04062 YLR399W-AYLR399W-A 105 nt0.65□□□□□ -2.31
RPN9Q04062 YMR172C-AYMR172C-A 384 nt0.65□□□□□ -2.31
RPN9Q04062 YNL146WYNL146W 303 nt0.65□□□□□ -2.31
RPN9Q04062 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
RPN9Q04062 YLR282CYLR282C 342 nt0.64□□□□□ -2.31
RPN9Q04062 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
RPN9Q04062 YMR160WYMR160W 2451 nt0.64□□□□□ -2.31
RPN9Q04062 YOR161W-AYOR161W-A 81 nt0.63□□□□□ -2.31
RPN9Q04062 PRP5YBR237W 2550 nt0.62□□□□□ -2.31
RPN9Q04062 LTE1YAL024C 4308 nt0.62□□□□□ -2.31
RPN9Q04062 YGL123C-AYGL123C-A 231 nt0.61□□□□□ -2.31
RPN9Q04062 YIL134C-AYIL134C-A 204 nt0.61□□□□□ -2.31
RPN9Q04062 YJL127W-AYJL127W-A 117 nt0.61□□□□□ -2.31
RPN9Q04062 tF(GAA)BtF(GAA)B 73 nt0.6□□□□□ -2.31
RPN9Q04062 tF(GAA)FtF(GAA)F 73 nt0.6□□□□□ -2.31
RPN9Q04062 tF(GAA)GtF(GAA)G 73 nt0.6□□□□□ -2.31
RPN9Q04062 tF(GAA)H1tF(GAA)H1 73 nt0.6□□□□□ -2.31
RPN9Q04062 tF(GAA)H2tF(GAA)H2 73 nt0.6□□□□□ -2.31
RPN9Q04062 tF(GAA)MtF(GAA)M 73 nt0.6□□□□□ -2.31
RPN9Q04062 tF(GAA)P1tF(GAA)P1 73 nt0.6□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 35 ms