Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ABCA4P78363 AL355355.2-201ENST00000442321 338 ntBASIC17.27■□□□□ 0.35
ABCA4P78363 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.27■□□□□ 0.35
ABCA4P78363 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.27■□□□□ 0.35
ABCA4P78363 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
ABCA4P78363 REXO1L10P-201ENST00000615707 1290 ntBASIC17.27■□□□□ 0.35
ABCA4P78363 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.27■□□□□ 0.35
ABCA4P78363 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ABCA4P78363 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCA4P78363 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.26■□□□□ 0.35
ABCA4P78363 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCA4P78363 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCA4P78363 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCA4P78363 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCA4P78363 HTR7P1-201ENST00000538670 1336 ntBASIC17.26■□□□□ 0.35
ABCA4P78363 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ABCA4P78363 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCA4P78363 FAM197Y1-201ENST00000421178 764 ntBASIC17.26■□□□□ 0.35
ABCA4P78363 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.26■□□□□ 0.35
ABCA4P78363 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.26■□□□□ 0.35
ABCA4P78363 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCA4P78363 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCA4P78363 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.26■□□□□ 0.35
ABCA4P78363 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ABCA4P78363 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCA4P78363 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCA4P78363 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.26■□□□□ 0.35
ABCA4P78363 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCA4P78363 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ABCA4P78363 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCA4P78363 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ABCA4P78363 AL031963.3-201ENST00000606441 850 ntBASIC17.26■□□□□ 0.35
ABCA4P78363 AL121603.2-201ENST00000557373 2117 ntBASIC17.25■□□□□ 0.35
ABCA4P78363 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ABCA4P78363 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.25■□□□□ 0.35
ABCA4P78363 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
ABCA4P78363 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ABCA4P78363 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCA4P78363 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCA4P78363 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.25■□□□□ 0.35
ABCA4P78363 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.25■□□□□ 0.35
ABCA4P78363 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ABCA4P78363 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCA4P78363 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.25■□□□□ 0.35
ABCA4P78363 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCA4P78363 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ABCA4P78363 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCA4P78363 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ABCA4P78363 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ABCA4P78363 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
ABCA4P78363 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ABCA4P78363 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.24■□□□□ 0.35
ABCA4P78363 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.24■□□□□ 0.35
ABCA4P78363 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCA4P78363 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ABCA4P78363 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.24■□□□□ 0.35
ABCA4P78363 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCA4P78363 AC004264.1-201ENST00000608354 794 ntBASIC17.24■□□□□ 0.35
ABCA4P78363 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.24■□□□□ 0.35
ABCA4P78363 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCA4P78363 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCA4P78363 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCA4P78363 PKD1P6-201ENST00000343738 4769 ntBASIC17.24■□□□□ 0.35
ABCA4P78363 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ABCA4P78363 AC079598.2-202ENST00000546624 1451 ntBASIC17.24■□□□□ 0.35
ABCA4P78363 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ABCA4P78363 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
ABCA4P78363 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.24■□□□□ 0.35
ABCA4P78363 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.24■□□□□ 0.35
ABCA4P78363 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.24■□□□□ 0.35
ABCA4P78363 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.24■□□□□ 0.35
ABCA4P78363 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.24■□□□□ 0.35
ABCA4P78363 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.24■□□□□ 0.35
ABCA4P78363 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ABCA4P78363 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.24■□□□□ 0.35
ABCA4P78363 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCA4P78363 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ABCA4P78363 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ABCA4P78363 KRT18P22-201ENST00000402024 1347 ntBASIC17.24■□□□□ 0.35
ABCA4P78363 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.23■□□□□ 0.35
ABCA4P78363 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ABCA4P78363 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ABCA4P78363 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.23■□□□□ 0.35
ABCA4P78363 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.23■□□□□ 0.35
ABCA4P78363 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.23■□□□□ 0.35
ABCA4P78363 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.23■□□□□ 0.35
ABCA4P78363 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.23■□□□□ 0.35
ABCA4P78363 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.23■□□□□ 0.35
ABCA4P78363 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ABCA4P78363 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.23■□□□□ 0.35
ABCA4P78363 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ABCA4P78363 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ABCA4P78363 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ABCA4P78363 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ABCA4P78363 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ABCA4P78363 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.23■□□□□ 0.35
ABCA4P78363 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.23■□□□□ 0.35
ABCA4P78363 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.23■□□□□ 0.35
ABCA4P78363 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ABCA4P78363 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms