Protein–RNA interactions for Protein: P51534

SHE4, SWI5-dependent HO expression protein 4, yeastyeast

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE4P51534 YOR282WYOR282W 321 nt0.82□□□□□ -2.28
SHE4P51534 GEA2YEL022W 4380 nt0.82□□□□□ -2.28
SHE4P51534 YDL073WYDL073W 2955 nt0.81□□□□□ -2.28
SHE4P51534 STE5YDR103W 2754 nt0.81□□□□□ -2.28
SHE4P51534 PTP2YOR208W 2253 nt0.81□□□□□ -2.28
SHE4P51534 YIL032CYIL032C 357 nt0.81□□□□□ -2.28
SHE4P51534 HMRA2YCR096C 360 nt0.8□□□□□ -2.28
SHE4P51534 ECM12YHR021W-A 456 nt0.8□□□□□ -2.28
SHE4P51534 YMR193C-AYMR193C-A 387 nt0.8□□□□□ -2.28
SHE4P51534 YOR011W-AYOR011W-A 207 nt0.8□□□□□ -2.28
SHE4P51534 COG8YML071C 1824 nt0.8□□□□□ -2.28
SHE4P51534 PRP16YKR086W 3216 nt0.78□□□□□ -2.28
SHE4P51534 VIK1YPL253C 1944 nt0.78□□□□□ -2.28
SHE4P51534 YPR010C-AYPR010C-A 219 nt0.78□□□□□ -2.28
SHE4P51534 RPL39YJL189W 156 nt0.77□□□□□ -2.29
SHE4P51534 YMR031W-AYMR031W-A 327 nt0.77□□□□□ -2.29
SHE4P51534 MCM10YIL150C 1716 nt0.77□□□□□ -2.29
SHE4P51534 YHR063W-AYHR063W-A 336 nt0.76□□□□□ -2.29
SHE4P51534 YPR159C-AYPR159C-A 102 nt0.76□□□□□ -2.29
SHE4P51534 SEC1YDR164C 2175 nt0.75□□□□□ -2.29
SHE4P51534 OLI1Q0130 231 nt0.75□□□□□ -2.29
SHE4P51534 RPS27BYHR021C 249 nt0.75□□□□□ -2.29
SHE4P51534 YMR321CYMR321C 318 nt0.75□□□□□ -2.29
SHE4P51534 SGF11YPL047W 300 nt0.75□□□□□ -2.29
SHE4P51534 YMR272W-AYMR272W-A 114 nt0.74□□□□□ -2.29
SHE4P51534 YNL146WYNL146W 303 nt0.74□□□□□ -2.29
SHE4P51534 CSE2YNR010W 450 nt0.74□□□□□ -2.29
SHE4P51534 RPS30BYOR182C 192 nt0.74□□□□□ -2.29
SHE4P51534 UTP20YBL004W 7482 nt0.74□□□□□ -2.29
SHE4P51534 YOR015WYOR015W 360 nt0.73□□□□□ -2.29
SHE4P51534 RAD61YDR014W 1944 nt0.72□□□□□ -2.29
SHE4P51534 YGR069WYGR069W 336 nt0.72□□□□□ -2.29
SHE4P51534 YNL028WYNL028W 318 nt0.72□□□□□ -2.29
SHE4P51534 YNL211CYNL211C 261 nt0.72□□□□□ -2.29
SHE4P51534 RKR1YMR247C 4689 nt0.71□□□□□ -2.3
SHE4P51534 CMC4YMR194C-B 222 nt0.71□□□□□ -2.3
SHE4P51534 YOR218CYOR218C 420 nt0.71□□□□□ -2.3
SHE4P51534 BFR2YDR299W 1605 nt0.71□□□□□ -2.3
SHE4P51534 ASE1YOR058C 2658 nt0.7□□□□□ -2.3
SHE4P51534 YDR354C-AYDR354C-A 144 nt0.7□□□□□ -2.3
SHE4P51534 YFR012W-AYFR012W-A 87 nt0.7□□□□□ -2.3
SHE4P51534 YIL142C-AYIL142C-A 333 nt0.7□□□□□ -2.3
SHE4P51534 YNL277W-AYNL277W-A 189 nt0.7□□□□□ -2.3
SHE4P51534 YPL044CYPL044C 549 nt0.7□□□□□ -2.3
SHE4P51534 NOP9YJL010C 2001 nt0.69□□□□□ -2.3
SHE4P51534 PMP1YCR024C-A 123 nt0.69□□□□□ -2.3
SHE4P51534 snR65snR65 100 nt0.69□□□□□ -2.3
SHE4P51534 YEL020C-BYEL020C-B 198 nt0.68□□□□□ -2.3
SHE4P51534 YLR120W-AYLR120W-A 102 nt0.68□□□□□ -2.3
SHE4P51534 YMR172C-AYMR172C-A 384 nt0.67□□□□□ -2.3
SHE4P51534 YOR231C-AYOR231C-A 201 nt0.67□□□□□ -2.3
SHE4P51534 NPR2YEL062W 1848 nt0.66□□□□□ -2.3
SHE4P51534 YDL185C-AYDL185C-A 228 nt0.65□□□□□ -2.31
SHE4P51534 YGL052WYGL052W 306 nt0.65□□□□□ -2.31
SHE4P51534 YJL197C-AYJL197C-A 282 nt0.65□□□□□ -2.31
SHE4P51534 YLL019W-AYLL019W-A 93 nt0.65□□□□□ -2.31
SHE4P51534 YPR092WYPR092W 306 nt0.65□□□□□ -2.31
SHE4P51534 YMR160WYMR160W 2451 nt0.65□□□□□ -2.31
SHE4P51534 MYO1YHR023W 5787 nt0.64□□□□□ -2.31
SHE4P51534 snR74snR74 88 nt0.64□□□□□ -2.31
SHE4P51534 PAA1YDR071C 576 nt0.64□□□□□ -2.31
SHE4P51534 YOR008C-AYOR008C-A 225 nt0.64□□□□□ -2.31
SHE4P51534 LTE1YAL024C 4308 nt0.64□□□□□ -2.31
SHE4P51534 tF(GAA)BtF(GAA)B 73 nt0.63□□□□□ -2.31
SHE4P51534 tF(GAA)FtF(GAA)F 73 nt0.63□□□□□ -2.31
SHE4P51534 tF(GAA)GtF(GAA)G 73 nt0.63□□□□□ -2.31
SHE4P51534 tF(GAA)H1tF(GAA)H1 73 nt0.63□□□□□ -2.31
SHE4P51534 tF(GAA)H2tF(GAA)H2 73 nt0.63□□□□□ -2.31
SHE4P51534 tF(GAA)MtF(GAA)M 73 nt0.63□□□□□ -2.31
SHE4P51534 tF(GAA)P1tF(GAA)P1 73 nt0.63□□□□□ -2.31
SHE4P51534 tF(GAA)P2tF(GAA)P2 73 nt0.63□□□□□ -2.31
SHE4P51534 YJL026C-AYJL026C-A 222 nt0.63□□□□□ -2.31
SHE4P51534 YAL067W-AYAL067W-A 228 nt0.62□□□□□ -2.31
SHE4P51534 CHS6YJL099W 2241 nt0.61□□□□□ -2.31
SHE4P51534 YML002WYML002W 2214 nt0.61□□□□□ -2.31
SHE4P51534 YER181CYER181C 324 nt0.6□□□□□ -2.31
SHE4P51534 RPL26BYGR034W 384 nt0.6□□□□□ -2.31
SHE4P51534 YCR018C-AYCR018C-A 255 nt0.59□□□□□ -2.31
SHE4P51534 tT(AGU)BtT(AGU)B 73 nt0.59□□□□□ -2.31
SHE4P51534 tT(AGU)CtT(AGU)C 73 nt0.59□□□□□ -2.31
SHE4P51534 tT(AGU)DtT(AGU)D 73 nt0.59□□□□□ -2.31
SHE4P51534 tT(AGU)HtT(AGU)H 73 nt0.59□□□□□ -2.31
SHE4P51534 tT(AGU)I1tT(AGU)I1 73 nt0.59□□□□□ -2.31
SHE4P51534 tT(AGU)I2tT(AGU)I2 73 nt0.59□□□□□ -2.31
SHE4P51534 tT(AGU)JtT(AGU)J 73 nt0.59□□□□□ -2.31
SHE4P51534 tT(AGU)N1tT(AGU)N1 73 nt0.59□□□□□ -2.31
SHE4P51534 tT(AGU)N2tT(AGU)N2 73 nt0.59□□□□□ -2.31
SHE4P51534 tT(AGU)O1tT(AGU)O1 73 nt0.59□□□□□ -2.31
SHE4P51534 tT(AGU)O2tT(AGU)O2 73 nt0.59□□□□□ -2.31
SHE4P51534 YOR072W-BYOR072W-B 162 nt0.59□□□□□ -2.31
SHE4P51534 YPL152W-AYPL152W-A 99 nt0.59□□□□□ -2.31
SHE4P51534 UTP10YJL109C 5310 nt0.59□□□□□ -2.32
SHE4P51534 COY1YKL179C 2040 nt0.59□□□□□ -2.32
SHE4P51534 snR190snR190 190 nt0.58□□□□□ -2.32
SHE4P51534 tF(GAA)QtF(GAA)Q 75 nt0.56□□□□□ -2.32
SHE4P51534 YGL041CYGL041C 204 nt0.56□□□□□ -2.32
SHE4P51534 YMR307C-AYMR307C-A 195 nt0.56□□□□□ -2.32
SHE4P51534 YOR161W-AYOR161W-A 81 nt0.56□□□□□ -2.32
SHE4P51534 YIR030W-AYIR030W-A 384 nt0.55□□□□□ -2.32
SHE4P51534 YLR282CYLR282C 342 nt0.55□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 45.3 ms