Protein–RNA interactions for Protein: P40092

SPI1, Uncharacterized cell wall protein SPI1, yeast

Predictions only

Length 148 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	P40092	YER084W-A	YER084W-A	513 nt		-1.76	□□□□□ -2.69
SPI1	P40092	POP6	YGR030C	477 nt		-1.76	□□□□□ -2.69
SPI1	P40092	YIL032C	YIL032C	357 nt		-1.76	□□□□□ -2.69
SPI1	P40092	VAM3	YOR106W	852 nt		-1.76	□□□□□ -2.69
SPI1	P40092	YPL182C	YPL182C	384 nt		-1.76	□□□□□ -2.69
SPI1	P40092	IRC16	YPR038W	360 nt		-1.76	□□□□□ -2.69
SPI1	P40092	AGA2	YGL032C	264 nt		-1.77	□□□□□ -2.69
SPI1	P40092	BER1	YLR412W	825 nt		-1.77	□□□□□ -2.69
SPI1	P40092	YGR228W	YGR228W	345 nt		-1.78	□□□□□ -2.69
SPI1	P40092	YNL067W-A	YNL067W-A	147 nt		-1.78	□□□□□ -2.69
SPI1	P40092	YOR161W-A	YOR161W-A	81 nt		-1.78	□□□□□ -2.69
SPI1	P40092	YBR072C-A	YBR072C-A	162 nt		-1.78	□□□□□ -2.69
SPI1	P40092	snR72	snR72	98 nt		-1.79	□□□□□ -2.7
SPI1	P40092	POL32	YJR043C	1053 nt		-1.79	□□□□□ -2.7
SPI1	P40092	snR5	snR5	204 nt		-1.81	□□□□□ -2.7
SPI1	P40092	tY(GUA)Q	tY(GUA)Q	84 nt		-1.81	□□□□□ -2.7
SPI1	P40092	YBL062W	YBL062W	381 nt		-1.81	□□□□□ -2.7
SPI1	P40092	APQ12	YIL040W	417 nt		-1.82	□□□□□ -2.7
SPI1	P40092	YER188C-A	YER188C-A	300 nt		-1.83	□□□□□ -2.7
SPI1	P40092	YLR154W-F	YLR154W-F	141 nt		-1.83	□□□□□ -2.7
SPI1	P40092	YKL202W	YKL202W	582 nt		-1.84	□□□□□ -2.7
SPI1	P40092	YOR366W	YOR366W	354 nt		-1.84	□□□□□ -2.7
SPI1	P40092	snR49	snR49	165 nt		-1.84	□□□□□ -2.7
SPI1	P40092	YIL002W-A	YIL002W-A	210 nt		-1.85	□□□□□ -2.71
SPI1	P40092	YCR100C	YCR100C	951 nt		-1.86	□□□□□ -2.71
SPI1	P40092	ACF4	YJR083C	930 nt		-1.87	□□□□□ -2.71
SPI1	P40092	SGF11	YPL047W	300 nt		-1.87	□□□□□ -2.71
SPI1	P40092	YMR304C-A	YMR304C-A	351 nt		-1.88	□□□□□ -2.71
SPI1	P40092	YJL020W-A	YJL020W-A	258 nt		-1.89	□□□□□ -2.71
SPI1	P40092	YLR264C-A	YLR264C-A	117 nt		-1.89	□□□□□ -2.71
SPI1	P40092	YBL107W-A	YBL107W-A	105 nt		-1.89	□□□□□ -2.71
SPI1	P40092	SKI7	YOR076C	2244 nt		-1.89	□□□□□ -2.71
SPI1	P40092	MND1	YGL183C	660 nt		-1.9	□□□□□ -2.71
SPI1	P40092	YGL239C	YGL239C	315 nt		-1.9	□□□□□ -2.71
SPI1	P40092	RRI2	YOL117W	1938 nt		-1.9	□□□□□ -2.71
SPI1	P40092	YGL015C	YGL015C	393 nt		-1.91	□□□□□ -2.72
SPI1	P40092	YOR011W-A	YOR011W-A	207 nt		-1.92	□□□□□ -2.72
SPI1	P40092	YOR170W	YOR170W	306 nt		-1.93	□□□□□ -2.72
SPI1	P40092	YFL063W	YFL063W	456 nt		-1.94	□□□□□ -2.72
SPI1	P40092	snR57	snR57	88 nt		-1.95	□□□□□ -2.72
SPI1	P40092	CUP1-1	YHR053C	186 nt		-1.96	□□□□□ -2.72
SPI1	P40092	CUP1-2	YHR055C	186 nt		-1.96	□□□□□ -2.72
SPI1	P40092	YDR220C	YDR220C	294 nt		-1.97	□□□□□ -2.72
SPI1	P40092	SCEI	Q0160	708 nt		-1.97	□□□□□ -2.72
SPI1	P40092	YNL058C	YNL058C	951 nt		-1.97	□□□□□ -2.72
SPI1	P40092	IRC13	YOR235W	315 nt		-1.97	□□□□□ -2.72
SPI1	P40092	YOR192C-C	YOR192C-C	237 nt		-1.98	□□□□□ -2.73
SPI1	P40092	snR51	snR51	107 nt		-1.98	□□□□□ -2.73
SPI1	P40092	YNL146C-A	YNL146C-A	195 nt		-2.01	□□□□□ -2.73
SPI1	P40092	POP7	YBR167C	423 nt		-2.01	□□□□□ -2.73
SPI1	P40092	RPL22B	YFL034C-A	369 nt		-2.02	□□□□□ -2.73
SPI1	P40092	YHR050W-A	YHR050W-A	171 nt		-2.02	□□□□□ -2.73
SPI1	P40092	YPT6	YLR262C	648 nt		-2.02	□□□□□ -2.73
SPI1	P40092	RPS30A	YLR287C-A	192 nt		-2.02	□□□□□ -2.73
SPI1	P40092	ILM1	YJR118C	612 nt		-2.03	□□□□□ -2.73
SPI1	P40092	YMR013C-A	YMR013C-A	150 nt		-2.03	□□□□□ -2.73
SPI1	P40092	YDR366C	YDR366C	399 nt		-2.04	□□□□□ -2.74
SPI1	P40092	YER135C	YER135C	393 nt		-2.06	□□□□□ -2.74
SPI1	P40092	YLR163W-A	YLR163W-A	114 nt		-2.06	□□□□□ -2.74
SPI1	P40092	snR189	snR189	189 nt		-2.07	□□□□□ -2.74
SPI1	P40092	YPR016W-A	YPR016W-A	261 nt		-2.07	□□□□□ -2.74
SPI1	P40092	ZEO1	YOL109W	342 nt		-2.09	□□□□□ -2.74
SPI1	P40092	YPR010C-A	YPR010C-A	219 nt		-2.09	□□□□□ -2.74
SPI1	P40092	BUD26	YDR241W	288 nt		-2.1	□□□□□ -2.75
SPI1	P40092	FYV7	YLR068W	456 nt		-2.1	□□□□□ -2.75
SPI1	P40092	PMP2	YEL017C-A	132 nt		-2.11	□□□□□ -2.75
SPI1	P40092	YPL068C	YPL068C	882 nt		-2.11	□□□□□ -2.75
SPI1	P40092	snR74	snR74	88 nt		-2.12	□□□□□ -2.75
SPI1	P40092	HMLALPHA2	YCL067C	633 nt		-2.13	□□□□□ -2.75
SPI1	P40092	MATALPHA2	YCR039C	633 nt		-2.13	□□□□□ -2.75
SPI1	P40092	HMRA2	YCR096C	360 nt		-2.13	□□□□□ -2.75
SPI1	P40092	SRB7	YDR308C	423 nt		-2.13	□□□□□ -2.75
SPI1	P40092	SDH6	YDR379C-A	240 nt		-2.13	□□□□□ -2.75
SPI1	P40092	YER053C-A	YER053C-A	114 nt		-2.14	□□□□□ -2.75
SPI1	P40092	YGL052W	YGL052W	306 nt		-2.16	□□□□□ -2.76
SPI1	P40092	YCR001W	YCR001W	315 nt		-2.17	□□□□□ -2.76
SPI1	P40092	YGL230C	YGL230C	444 nt		-2.17	□□□□□ -2.76
SPI1	P40092	YPR039W	YPR039W	336 nt		-2.17	□□□□□ -2.76
SPI1	P40092	YHR125W	YHR125W	306 nt		-2.2	□□□□□ -2.76
SPI1	P40092	MRPL32	YCR003W	552 nt		-2.22	□□□□□ -2.76
SPI1	P40092	JLP2	YMR132C	627 nt		-2.23	□□□□□ -2.77
SPI1	P40092	CBS1	YDL069C	690 nt		-2.24	□□□□□ -2.77
SPI1	P40092	YJR087W	YJR087W	351 nt		-2.24	□□□□□ -2.77
SPI1	P40092	AIM29	YKR074W	468 nt		-2.24	□□□□□ -2.77
SPI1	P40092	YGR025W	YGR025W	303 nt		-2.25	□□□□□ -2.77
SPI1	P40092	YBR126W-B	YBR126W-B	144 nt		-2.25	□□□□□ -2.77
SPI1	P40092	YKL100W-A	YKL100W-A	90 nt		-2.26	□□□□□ -2.77
SPI1	P40092	YDR354C-A	YDR354C-A	144 nt		-2.27	□□□□□ -2.77
SPI1	P40092	CDC65	tQ(CUG)M	72 nt		-2.27	□□□□□ -2.77
SPI1	P40092	YNL303W	YNL303W	348 nt		-2.27	□□□□□ -2.77
SPI1	P40092	YAR029W	YAR029W	225 nt		-2.29	□□□□□ -2.78
SPI1	P40092	YFR009W-A	YFR009W-A	258 nt		-2.3	□□□□□ -2.78
SPI1	P40092	YKL083W	YKL083W	615 nt		-2.31	□□□□□ -2.78
SPI1	P40092	YLR334C	YLR334C	381 nt		-2.31	□□□□□ -2.78
SPI1	P40092	HUR1	YGL168W	333 nt		-2.32	□□□□□ -2.78
SPI1	P40092	YPL229W	YPL229W	621 nt		-2.33	□□□□□ -2.78
SPI1	P40092	YLR456W	YLR456W	615 nt		-2.36	□□□□□ -2.79
SPI1	P40092	CSE2	YNR010W	450 nt		-2.37	□□□□□ -2.79
SPI1	P40092	YEL020C-B	YEL020C-B	198 nt		-2.38	□□□□□ -2.79
SPI1	P40092	YGR240C-A	YGR240C-A	201 nt		-2.38	□□□□□ -2.79

Retrieved 100 of 7,029 protein–RNA pairs in 42.1 ms