Protein–RNA interactions for Protein: P38872

PFS1, Prospore formation at selected spindle poles protein 1, yeastyeast

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PFS1P38872 tF(GAA)H2tF(GAA)H2 73 nt1.01□□□□□ -2.25
PFS1P38872 tF(GAA)MtF(GAA)M 73 nt1.01□□□□□ -2.25
PFS1P38872 tF(GAA)P1tF(GAA)P1 73 nt1.01□□□□□ -2.25
PFS1P38872 tF(GAA)P2tF(GAA)P2 73 nt1.01□□□□□ -2.25
PFS1P38872 YOR231C-AYOR231C-A 201 nt1.01□□□□□ -2.25
PFS1P38872 YPR010C-AYPR010C-A 219 nt1.01□□□□□ -2.25
PFS1P38872 RPS27BYHR021C 249 nt1□□□□□ -2.25
PFS1P38872 YNL277W-AYNL277W-A 189 nt1□□□□□ -2.25
PFS1P38872 CSE2YNR010W 450 nt1□□□□□ -2.25
PFS1P38872 EAF1YDR359C 2949 nt1□□□□□ -2.25
PFS1P38872 STB6YKL072W 2301 nt0.99□□□□□ -2.25
PFS1P38872 YNL028WYNL028W 318 nt0.99□□□□□ -2.25
PFS1P38872 YOR218CYOR218C 420 nt0.99□□□□□ -2.25
PFS1P38872 YBR200W-AYBR200W-A 165 nt0.99□□□□□ -2.25
PFS1P38872 UBP3YER151C 2739 nt0.99□□□□□ -2.25
PFS1P38872 RAD61YDR014W 1944 nt0.99□□□□□ -2.25
PFS1P38872 YOR008C-AYOR008C-A 225 nt0.98□□□□□ -2.25
PFS1P38872 NUP157YER105C 4176 nt0.97□□□□□ -2.25
PFS1P38872 YER181CYER181C 324 nt0.97□□□□□ -2.25
PFS1P38872 YOR011W-AYOR011W-A 207 nt0.97□□□□□ -2.25
PFS1P38872 YBR064WYBR064W 429 nt0.97□□□□□ -2.25
PFS1P38872 YGR069WYGR069W 336 nt0.96□□□□□ -2.26
PFS1P38872 YPR117WYPR117W 7470 nt0.95□□□□□ -2.26
PFS1P38872 WAR1YML076C 2835 nt0.95□□□□□ -2.26
PFS1P38872 YIL142C-AYIL142C-A 333 nt0.95□□□□□ -2.26
PFS1P38872 IES4YOR189W 351 nt0.95□□□□□ -2.26
PFS1P38872 BEM2YER155C 6504 nt0.94□□□□□ -2.26
PFS1P38872 YLR120W-AYLR120W-A 102 nt0.94□□□□□ -2.26
PFS1P38872 UTP20YBL004W 7482 nt0.94□□□□□ -2.26
PFS1P38872 YEL020C-BYEL020C-B 198 nt0.93□□□□□ -2.26
PFS1P38872 YOR015WYOR015W 360 nt0.93□□□□□ -2.26
PFS1P38872 EMT1tM(CAU)D 73 nt0.92□□□□□ -2.26
PFS1P38872 EMT5tM(CAU)J1 73 nt0.92□□□□□ -2.26
PFS1P38872 EMT3tM(CAU)J2 73 nt0.92□□□□□ -2.26
PFS1P38872 EMT4tM(CAU)M 73 nt0.92□□□□□ -2.26
PFS1P38872 EMT2tM(CAU)O2 73 nt0.92□□□□□ -2.26
PFS1P38872 YMR172C-AYMR172C-A 384 nt0.92□□□□□ -2.26
PFS1P38872 KAP120YPL125W 3099 nt0.91□□□□□ -2.26
PFS1P38872 OLI1Q0130 231 nt0.91□□□□□ -2.26
PFS1P38872 ECM12YHR021W-A 456 nt0.91□□□□□ -2.26
PFS1P38872 YJL197C-AYJL197C-A 282 nt0.91□□□□□ -2.26
PFS1P38872 YML099W-AYML099W-A 330 nt0.91□□□□□ -2.26
PFS1P38872 MCM10YIL150C 1716 nt0.91□□□□□ -2.26
PFS1P38872 YGL052WYGL052W 306 nt0.9□□□□□ -2.27
PFS1P38872 YPL152W-AYPL152W-A 99 nt0.9□□□□□ -2.27
PFS1P38872 SGF11YPL047W 300 nt0.89□□□□□ -2.27
PFS1P38872 SMC1YFL008W 3678 nt0.88□□□□□ -2.27
PFS1P38872 NOP9YJL010C 2001 nt0.88□□□□□ -2.27
PFS1P38872 PAA1YDR071C 576 nt0.87□□□□□ -2.27
PFS1P38872 ISD11YER048W-A 285 nt0.87□□□□□ -2.27
PFS1P38872 CMC4YMR194C-B 222 nt0.87□□□□□ -2.27
PFS1P38872 YHR063W-AYHR063W-A 336 nt0.86□□□□□ -2.27
PFS1P38872 YNL211CYNL211C 261 nt0.86□□□□□ -2.27
PFS1P38872 YPR092WYPR092W 306 nt0.86□□□□□ -2.27
PFS1P38872 YDR354C-AYDR354C-A 144 nt0.85□□□□□ -2.27
PFS1P38872 YPL044CYPL044C 549 nt0.85□□□□□ -2.27
PFS1P38872 snR49snR49 165 nt0.85□□□□□ -2.27
PFS1P38872 GEA2YEL022W 4380 nt0.85□□□□□ -2.27
PFS1P38872 YJL026C-AYJL026C-A 222 nt0.84□□□□□ -2.27
PFS1P38872 YOR282WYOR282W 321 nt0.84□□□□□ -2.27
PFS1P38872 MYO1YHR023W 5787 nt0.84□□□□□ -2.28
PFS1P38872 YDL196WYDL196W 330 nt0.83□□□□□ -2.28
PFS1P38872 YAL067W-AYAL067W-A 228 nt0.83□□□□□ -2.28
PFS1P38872 YOL014WYOL014W 375 nt0.83□□□□□ -2.28
PFS1P38872 YOR072W-BYOR072W-B 162 nt0.83□□□□□ -2.28
PFS1P38872 YMR160WYMR160W 2451 nt0.82□□□□□ -2.28
PFS1P38872 YMR307C-AYMR307C-A 195 nt0.82□□□□□ -2.28
PFS1P38872 ASE1YOR058C 2658 nt0.82□□□□□ -2.28
PFS1P38872 YCR022CYCR022C 345 nt0.81□□□□□ -2.28
PFS1P38872 snR74snR74 88 nt0.81□□□□□ -2.28
PFS1P38872 RPL26BYGR034W 384 nt0.81□□□□□ -2.28
PFS1P38872 YLL019W-AYLL019W-A 93 nt0.81□□□□□ -2.28
PFS1P38872 PRP16YKR086W 3216 nt0.8□□□□□ -2.28
PFS1P38872 tF(GAA)QtF(GAA)Q 75 nt0.8□□□□□ -2.28
PFS1P38872 YDL073WYDL073W 2955 nt0.79□□□□□ -2.28
PFS1P38872 snR55snR55 98 nt0.79□□□□□ -2.28
PFS1P38872 PMP1YCR024C-A 123 nt0.79□□□□□ -2.28
PFS1P38872 YFR012W-AYFR012W-A 87 nt0.78□□□□□ -2.28
PFS1P38872 YGL188C-AYGL188C-A 141 nt0.78□□□□□ -2.28
PFS1P38872 YIR030W-AYIR030W-A 384 nt0.78□□□□□ -2.28
PFS1P38872 YOL155W-AYOL155W-A 135 nt0.78□□□□□ -2.28
PFS1P38872 BFR2YDR299W 1605 nt0.78□□□□□ -2.29
PFS1P38872 YDL185C-AYDL185C-A 228 nt0.76□□□□□ -2.29
PFS1P38872 snR8snR8 190 nt0.75□□□□□ -2.29
PFS1P38872 YKL145W-AYKL145W-A 93 nt0.75□□□□□ -2.29
PFS1P38872 ABF2YMR072W 552 nt0.75□□□□□ -2.29
PFS1P38872 YBR182C-AYBR182C-A 195 nt0.75□□□□□ -2.29
PFS1P38872 YKU70YMR284W 1809 nt0.75□□□□□ -2.29
PFS1P38872 YCR018C-AYCR018C-A 255 nt0.74□□□□□ -2.29
PFS1P38872 SEC8YPR055W 3198 nt0.74□□□□□ -2.29
PFS1P38872 YGL041CYGL041C 204 nt0.73□□□□□ -2.29
PFS1P38872 RKR1YMR247C 4689 nt0.72□□□□□ -2.29
PFS1P38872 tT(AGU)BtT(AGU)B 73 nt0.72□□□□□ -2.29
PFS1P38872 tT(AGU)CtT(AGU)C 73 nt0.72□□□□□ -2.29
PFS1P38872 tT(AGU)DtT(AGU)D 73 nt0.72□□□□□ -2.29
PFS1P38872 tT(AGU)HtT(AGU)H 73 nt0.72□□□□□ -2.29
PFS1P38872 tT(AGU)I1tT(AGU)I1 73 nt0.72□□□□□ -2.29
PFS1P38872 tT(AGU)I2tT(AGU)I2 73 nt0.72□□□□□ -2.29
PFS1P38872 tT(AGU)JtT(AGU)J 73 nt0.72□□□□□ -2.29
PFS1P38872 tT(AGU)N1tT(AGU)N1 73 nt0.72□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms