Protein–RNA interactions for Protein: P0CX55

RPS18A, 40S ribosomal protein S18-A, yeastyeast

Known RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS18AP0CX55 KAP120YPL125W 3099 nt0.85□□□□□ -2.27
RPS18AP0CX55 NST1YNL091W 3723 nt0.85□□□□□ -2.27
RPS18AP0CX55 CMC4YMR194C-B 222 nt0.84□□□□□ -2.27
RPS18AP0CX55 YNL211CYNL211C 261 nt0.84□□□□□ -2.27
RPS18AP0CX55 YPL044CYPL044C 549 nt0.83□□□□□ -2.28
RPS18AP0CX55 NOP9YJL010C 2001 nt0.82□□□□□ -2.28
RPS18AP0CX55 DOP1YDR141C 5097 nt0.82□□□□□ -2.28
RPS18AP0CX55 RAD61YDR014W 1944 nt0.82□□□□□ -2.28
RPS18AP0CX55 ISD11YER048W-A 285 nt0.82□□□□□ -2.28
RPS18AP0CX55 EMT1tM(CAU)D 73 nt0.82□□□□□ -2.28
RPS18AP0CX55 EMT5tM(CAU)J1 73 nt0.82□□□□□ -2.28
RPS18AP0CX55 EMT3tM(CAU)J2 73 nt0.82□□□□□ -2.28
RPS18AP0CX55 EMT4tM(CAU)M 73 nt0.82□□□□□ -2.28
RPS18AP0CX55 EMT2tM(CAU)O2 73 nt0.82□□□□□ -2.28
RPS18AP0CX55 YMR031W-AYMR031W-A 327 nt0.82□□□□□ -2.28
RPS18AP0CX55 YNL028WYNL028W 318 nt0.82□□□□□ -2.28
RPS18AP0CX55 YOR015WYOR015W 360 nt0.82□□□□□ -2.28
RPS18AP0CX55 RKR1YMR247C 4689 nt0.82□□□□□ -2.28
RPS18AP0CX55 IES4YOR189W 351 nt0.81□□□□□ -2.28
RPS18AP0CX55 PAU24YBR301W 363 nt0.81□□□□□ -2.28
RPS18AP0CX55 BFR2YDR299W 1605 nt0.8□□□□□ -2.28
RPS18AP0CX55 YFR012W-AYFR012W-A 87 nt0.8□□□□□ -2.28
RPS18AP0CX55 YNL146WYNL146W 303 nt0.8□□□□□ -2.28
RPS18AP0CX55 YNL277W-AYNL277W-A 189 nt0.8□□□□□ -2.28
RPS18AP0CX55 YPR010C-AYPR010C-A 219 nt0.8□□□□□ -2.28
RPS18AP0CX55 ASE1YOR058C 2658 nt0.79□□□□□ -2.28
RPS18AP0CX55 YDR354C-AYDR354C-A 144 nt0.79□□□□□ -2.28
RPS18AP0CX55 YLR120W-AYLR120W-A 102 nt0.79□□□□□ -2.28
RPS18AP0CX55 YOR282WYOR282W 321 nt0.79□□□□□ -2.28
RPS18AP0CX55 PMP1YCR024C-A 123 nt0.78□□□□□ -2.28
RPS18AP0CX55 PAA1YDR071C 576 nt0.78□□□□□ -2.28
RPS18AP0CX55 YGR069WYGR069W 336 nt0.78□□□□□ -2.28
RPS18AP0CX55 YDL073WYDL073W 2955 nt0.78□□□□□ -2.29
RPS18AP0CX55 snR65snR65 100 nt0.77□□□□□ -2.29
RPS18AP0CX55 YGR130CYGR130C 2451 nt0.76□□□□□ -2.29
RPS18AP0CX55 IML1YJR138W 4755 nt0.76□□□□□ -2.29
RPS18AP0CX55 YJL026C-AYJL026C-A 222 nt0.76□□□□□ -2.29
RPS18AP0CX55 YDL185C-AYDL185C-A 228 nt0.75□□□□□ -2.29
RPS18AP0CX55 RPL26BYGR034W 384 nt0.75□□□□□ -2.29
RPS18AP0CX55 YAL067W-AYAL067W-A 228 nt0.75□□□□□ -2.29
RPS18AP0CX55 UBP3YER151C 2739 nt0.75□□□□□ -2.29
RPS18AP0CX55 YJL197C-AYJL197C-A 282 nt0.74□□□□□ -2.29
RPS18AP0CX55 YEL020C-BYEL020C-B 198 nt0.73□□□□□ -2.29
RPS18AP0CX55 YGL052WYGL052W 306 nt0.73□□□□□ -2.29
RPS18AP0CX55 YMR172C-AYMR172C-A 384 nt0.73□□□□□ -2.29
RPS18AP0CX55 YOR008C-AYOR008C-A 225 nt0.73□□□□□ -2.29
RPS18AP0CX55 SEC1YDR164C 2175 nt0.73□□□□□ -2.29
RPS18AP0CX55 YLL019W-AYLL019W-A 93 nt0.72□□□□□ -2.29
RPS18AP0CX55 YOR231C-AYOR231C-A 201 nt0.72□□□□□ -2.29
RPS18AP0CX55 YPR092WYPR092W 306 nt0.72□□□□□ -2.29
RPS18AP0CX55 YPR117WYPR117W 7470 nt0.71□□□□□ -2.3
RPS18AP0CX55 YCR018C-AYCR018C-A 255 nt0.7□□□□□ -2.3
RPS18AP0CX55 snR74snR74 88 nt0.7□□□□□ -2.3
RPS18AP0CX55 PRP16YKR086W 3216 nt0.7□□□□□ -2.3
RPS18AP0CX55 NPR2YEL062W 1848 nt0.69□□□□□ -2.3
RPS18AP0CX55 YHR063W-AYHR063W-A 336 nt0.69□□□□□ -2.3
RPS18AP0CX55 CHS6YJL099W 2241 nt0.68□□□□□ -2.3
RPS18AP0CX55 YOR072W-BYOR072W-B 162 nt0.68□□□□□ -2.3
RPS18AP0CX55 ANS1YHR126C 480 nt0.67□□□□□ -2.3
RPS18AP0CX55 snR190snR190 190 nt0.67□□□□□ -2.3
RPS18AP0CX55 YPR160W-AYPR160W-A 81 nt0.67□□□□□ -2.3
RPS18AP0CX55 YMR307C-AYMR307C-A 195 nt0.66□□□□□ -2.3
RPS18AP0CX55 YPL152W-AYPL152W-A 99 nt0.66□□□□□ -2.3
RPS18AP0CX55 SEC8YPR055W 3198 nt0.66□□□□□ -2.3
RPS18AP0CX55 COY1YKL179C 2040 nt0.65□□□□□ -2.3
RPS18AP0CX55 YLR282CYLR282C 342 nt0.64□□□□□ -2.31
RPS18AP0CX55 LTE1YAL024C 4308 nt0.64□□□□□ -2.31
RPS18AP0CX55 YML002WYML002W 2214 nt0.64□□□□□ -2.31
RPS18AP0CX55 FYV10YIL097W 1551 nt0.63□□□□□ -2.31
RPS18AP0CX55 YLR399W-AYLR399W-A 105 nt0.63□□□□□ -2.31
RPS18AP0CX55 YOR161W-AYOR161W-A 81 nt0.63□□□□□ -2.31
RPS18AP0CX55 PRP5YBR237W 2550 nt0.63□□□□□ -2.31
RPS18AP0CX55 YER181CYER181C 324 nt0.61□□□□□ -2.31
RPS18AP0CX55 YGL123C-AYGL123C-A 231 nt0.61□□□□□ -2.31
RPS18AP0CX55 snR49snR49 165 nt0.61□□□□□ -2.31
RPS18AP0CX55 ULI1YFR026C 510 nt0.6□□□□□ -2.31
RPS18AP0CX55 tF(GAA)QtF(GAA)Q 75 nt0.59□□□□□ -2.31
RPS18AP0CX55 COX5BYIL111W 456 nt0.59□□□□□ -2.31
RPS18AP0CX55 BLI1YKL061W 342 nt0.59□□□□□ -2.31
RPS18AP0CX55 YMR272W-AYMR272W-A 114 nt0.59□□□□□ -2.31
RPS18AP0CX55 RPS30BYOR182C 192 nt0.59□□□□□ -2.31
RPS18AP0CX55 HAL9YOL089C 3093 nt0.59□□□□□ -2.32
RPS18AP0CX55 OST4YDL232W 111 nt0.58□□□□□ -2.32
RPS18AP0CX55 tN(GUU)QtN(GUU)Q 71 nt0.58□□□□□ -2.32
RPS18AP0CX55 YIR030W-AYIR030W-A 384 nt0.58□□□□□ -2.32
RPS18AP0CX55 YIL134C-AYIL134C-A 204 nt0.57□□□□□ -2.32
RPS18AP0CX55 COX12YLR038C 252 nt0.57□□□□□ -2.32
RPS18AP0CX55 PRP42YDR235W 1635 nt0.56□□□□□ -2.32
RPS18AP0CX55 snR55snR55 98 nt0.56□□□□□ -2.32
RPS18AP0CX55 YCR022CYCR022C 345 nt0.56□□□□□ -2.32
RPS18AP0CX55 tT(AGU)BtT(AGU)B 73 nt0.56□□□□□ -2.32
RPS18AP0CX55 tT(AGU)CtT(AGU)C 73 nt0.56□□□□□ -2.32
RPS18AP0CX55 tT(AGU)DtT(AGU)D 73 nt0.56□□□□□ -2.32
RPS18AP0CX55 tT(AGU)HtT(AGU)H 73 nt0.56□□□□□ -2.32
RPS18AP0CX55 tT(AGU)I1tT(AGU)I1 73 nt0.56□□□□□ -2.32
RPS18AP0CX55 tT(AGU)I2tT(AGU)I2 73 nt0.56□□□□□ -2.32
RPS18AP0CX55 tT(AGU)JtT(AGU)J 73 nt0.56□□□□□ -2.32
RPS18AP0CX55 tT(AGU)N1tT(AGU)N1 73 nt0.56□□□□□ -2.32
RPS18AP0CX55 tT(AGU)N2tT(AGU)N2 73 nt0.56□□□□□ -2.32
RPS18AP0CX55 tT(AGU)O1tT(AGU)O1 73 nt0.56□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 29 ms