Protein–RNA interactions for Protein: P0C2I6

TY1B-LR3, Transposon Ty1-LR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-LR3P0C2I6 YDR220CYDR220C 294 nt-0.83□□□□□ -2.54
TY1B-LR3P0C2I6 RPF1YHR088W 888 nt-0.84□□□□□ -2.54
TY1B-LR3P0C2I6 YIL066W-AYIL066W-A 444 nt-0.84□□□□□ -2.54
TY1B-LR3P0C2I6 TAR1YLR154W-C 375 nt-0.84□□□□□ -2.54
TY1B-LR3P0C2I6 ATG16YMR159C 453 nt-0.84□□□□□ -2.54
TY1B-LR3P0C2I6 COG6YNL041C 2520 nt-0.84□□□□□ -2.54
TY1B-LR3P0C2I6 IRC13YOR235W 315 nt-0.85□□□□□ -2.55
TY1B-LR3P0C2I6 RPS25BYLR333C 327 nt-0.85□□□□□ -2.55
TY1B-LR3P0C2I6 snR72snR72 98 nt-0.86□□□□□ -2.55
TY1B-LR3P0C2I6 YGL015CYGL015C 393 nt-0.86□□□□□ -2.55
TY1B-LR3P0C2I6 POP7YBR167C 423 nt-0.87□□□□□ -2.55
TY1B-LR3P0C2I6 YPT6YLR262C 648 nt-0.88□□□□□ -2.55
TY1B-LR3P0C2I6 YCR100CYCR100C 951 nt-0.88□□□□□ -2.55
TY1B-LR3P0C2I6 YJL020W-AYJL020W-A 258 nt-0.88□□□□□ -2.55
TY1B-LR3P0C2I6 EST1YLR233C 2100 nt-0.88□□□□□ -2.55
TY1B-LR3P0C2I6 YMR158W-BYMR158W-B 321 nt-0.88□□□□□ -2.55
TY1B-LR3P0C2I6 HMLALPHA2YCL067C 633 nt-0.9□□□□□ -2.55
TY1B-LR3P0C2I6 MATALPHA2YCR039C 633 nt-0.9□□□□□ -2.55
TY1B-LR3P0C2I6 HMRA2YCR096C 360 nt-0.9□□□□□ -2.55
TY1B-LR3P0C2I6 snR5snR5 204 nt-0.91□□□□□ -2.55
TY1B-LR3P0C2I6 YIL002W-AYIL002W-A 210 nt-0.91□□□□□ -2.55
TY1B-LR3P0C2I6 MRPL32YCR003W 552 nt-0.91□□□□□ -2.56
TY1B-LR3P0C2I6 PAU9YBL108C-A 129 nt-0.91□□□□□ -2.56
TY1B-LR3P0C2I6 SDH7YDR511W 402 nt-0.92□□□□□ -2.56
TY1B-LR3P0C2I6 YLR334CYLR334C 381 nt-0.92□□□□□ -2.56
TY1B-LR3P0C2I6 SGF11YPL047W 300 nt-0.92□□□□□ -2.56
TY1B-LR3P0C2I6 YER079WYER079W 633 nt-0.93□□□□□ -2.56
TY1B-LR3P0C2I6 AGA2YGL032C 264 nt-0.93□□□□□ -2.56
TY1B-LR3P0C2I6 snR161snR161 161 nt-0.93□□□□□ -2.56
TY1B-LR3P0C2I6 SNU13YEL026W 381 nt-0.93□□□□□ -2.56
TY1B-LR3P0C2I6 YML100W-AYML100W-A 174 nt-0.93□□□□□ -2.56
TY1B-LR3P0C2I6 YPR039WYPR039W 336 nt-0.93□□□□□ -2.56
TY1B-LR3P0C2I6 YGR270C-AYGR270C-A 219 nt-0.94□□□□□ -2.56
TY1B-LR3P0C2I6 YPL182CYPL182C 384 nt-0.95□□□□□ -2.56
TY1B-LR3P0C2I6 YBR072C-AYBR072C-A 162 nt-0.95□□□□□ -2.56
TY1B-LR3P0C2I6 YDL011CYDL011C 324 nt-0.96□□□□□ -2.56
TY1B-LR3P0C2I6 YLR282CYLR282C 342 nt-0.96□□□□□ -2.56
TY1B-LR3P0C2I6 YNL058CYNL058C 951 nt-0.96□□□□□ -2.56
TY1B-LR3P0C2I6 YPR092WYPR092W 306 nt-0.96□□□□□ -2.56
TY1B-LR3P0C2I6 APQ13YJL075C 417 nt-0.96□□□□□ -2.56
TY1B-LR3P0C2I6 YLR041WYLR041W 321 nt-0.96□□□□□ -2.56
TY1B-LR3P0C2I6 YML007C-AYML007C-A 111 nt-0.96□□□□□ -2.56
TY1B-LR3P0C2I6 TSC3YBR058C-A 243 nt-0.96□□□□□ -2.56
TY1B-LR3P0C2I6 CMC1YKL137W 336 nt-0.97□□□□□ -2.56
TY1B-LR3P0C2I6 YCR001WYCR001W 315 nt-0.98□□□□□ -2.57
TY1B-LR3P0C2I6 BLI1YKL061W 342 nt-0.98□□□□□ -2.57
TY1B-LR3P0C2I6 RPL22BYFL034C-A 369 nt-0.98□□□□□ -2.57
TY1B-LR3P0C2I6 AIM29YKR074W 468 nt-0.98□□□□□ -2.57
TY1B-LR3P0C2I6 YER135CYER135C 393 nt-0.99□□□□□ -2.57
TY1B-LR3P0C2I6 YLR217WYLR217W 324 nt-0.99□□□□□ -2.57
TY1B-LR3P0C2I6 YPR010C-AYPR010C-A 219 nt-0.99□□□□□ -2.57
TY1B-LR3P0C2I6 YGL230CYGL230C 444 nt-1□□□□□ -2.57
TY1B-LR3P0C2I6 YHR007C-AYHR007C-A 216 nt-1□□□□□ -2.57
TY1B-LR3P0C2I6 YDL007C-AYDL007C-A 258 nt-1.01□□□□□ -2.57
TY1B-LR3P0C2I6 YDR366CYDR366C 399 nt-1.01□□□□□ -2.57
TY1B-LR3P0C2I6 YMR254CYMR254C 309 nt-1.01□□□□□ -2.57
TY1B-LR3P0C2I6 YGR025WYGR025W 303 nt-1.01□□□□□ -2.57
TY1B-LR3P0C2I6 CUP1-1YHR053C 186 nt-1.02□□□□□ -2.57
TY1B-LR3P0C2I6 CUP1-2YHR055C 186 nt-1.02□□□□□ -2.57
TY1B-LR3P0C2I6 YGL123C-AYGL123C-A 231 nt-1.03□□□□□ -2.58
TY1B-LR3P0C2I6 FYV7YLR068W 456 nt-1.03□□□□□ -2.58
TY1B-LR3P0C2I6 YPL068CYPL068C 882 nt-1.03□□□□□ -2.58
TY1B-LR3P0C2I6 YER175W-AYER175W-A 165 nt-1.04□□□□□ -2.58
TY1B-LR3P0C2I6 MND1YGL183C 660 nt-1.06□□□□□ -2.58
TY1B-LR3P0C2I6 YHR130CYHR130C 336 nt-1.06□□□□□ -2.58
TY1B-LR3P0C2I6 YNL303WYNL303W 348 nt-1.06□□□□□ -2.58
TY1B-LR3P0C2I6 YDR426CYDR426C 378 nt-1.06□□□□□ -2.58
TY1B-LR3P0C2I6 YKL083WYKL083W 615 nt-1.06□□□□□ -2.58
TY1B-LR3P0C2I6 YPR002C-AYPR002C-A 198 nt-1.07□□□□□ -2.58
TY1B-LR3P0C2I6 ZEO1YOL109W 342 nt-1.08□□□□□ -2.58
TY1B-LR3P0C2I6 SDH6YDR379C-A 240 nt-1.08□□□□□ -2.58
TY1B-LR3P0C2I6 YAR029WYAR029W 225 nt-1.08□□□□□ -2.58
TY1B-LR3P0C2I6 YGL182CYGL182C 324 nt-1.09□□□□□ -2.58
TY1B-LR3P0C2I6 APQ12YIL040W 417 nt-1.1□□□□□ -2.59
TY1B-LR3P0C2I6 YBL071CYBL071C 309 nt-1.1□□□□□ -2.59
TY1B-LR3P0C2I6 YER084W-AYER084W-A 513 nt-1.11□□□□□ -2.59
TY1B-LR3P0C2I6 snR9snR9 187 nt-1.11□□□□□ -2.59
TY1B-LR3P0C2I6 YIL032CYIL032C 357 nt-1.11□□□□□ -2.59
TY1B-LR3P0C2I6 YKL100W-AYKL100W-A 90 nt-1.12□□□□□ -2.59
TY1B-LR3P0C2I6 YIR021W-AYIR021W-A 213 nt-1.13□□□□□ -2.59
TY1B-LR3P0C2I6 YLR264C-AYLR264C-A 117 nt-1.13□□□□□ -2.59
TY1B-LR3P0C2I6 YDR354C-AYDR354C-A 144 nt-1.14□□□□□ -2.59
TY1B-LR3P0C2I6 YLR154W-FYLR154W-F 141 nt-1.15□□□□□ -2.59
TY1B-LR3P0C2I6 YOR015WYOR015W 360 nt-1.15□□□□□ -2.59
TY1B-LR3P0C2I6 YOR192C-CYOR192C-C 237 nt-1.16□□□□□ -2.59
TY1B-LR3P0C2I6 YKL044WYKL044W 321 nt-1.16□□□□□ -2.6
TY1B-LR3P0C2I6 YBL062WYBL062W 381 nt-1.16□□□□□ -2.6
TY1B-LR3P0C2I6 YPL229WYPL229W 621 nt-1.16□□□□□ -2.6
TY1B-LR3P0C2I6 SCEIQ0160 708 nt-1.19□□□□□ -2.6
TY1B-LR3P0C2I6 snR49snR49 165 nt-1.19□□□□□ -2.6
TY1B-LR3P0C2I6 YJL182CYJL182C 318 nt-1.19□□□□□ -2.6
TY1B-LR3P0C2I6 YJR087WYJR087W 351 nt-1.22□□□□□ -2.6
TY1B-LR3P0C2I6 YOR161W-AYOR161W-A 81 nt-1.23□□□□□ -2.61
TY1B-LR3P0C2I6 YER053C-AYER053C-A 114 nt-1.25□□□□□ -2.61
TY1B-LR3P0C2I6 YFL012WYFL012W 447 nt-1.25□□□□□ -2.61
TY1B-LR3P0C2I6 YLR456WYLR456W 615 nt-1.26□□□□□ -2.61
TY1B-LR3P0C2I6 CBS1YDL069C 690 nt-1.26□□□□□ -2.61
TY1B-LR3P0C2I6 YEL020C-BYEL020C-B 198 nt-1.26□□□□□ -2.61
TY1B-LR3P0C2I6 YFL063WYFL063W 456 nt-1.26□□□□□ -2.61
TY1B-LR3P0C2I6 YFR009W-AYFR009W-A 258 nt-1.26□□□□□ -2.61
Retrieved 100 of 7,029 protein–RNA pairs in 27.6 ms