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Protein–RNA interactions for Protein: Q05471
SWR1, Helicase SWR1, yeast
Predictions only
Length
1,514 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (RIP-Chip)
Gene
UniProt Accession
Gene
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
Detected Interaction
SWR1
Q05471
RSM23
YGL129C
1353 nt
-0.92
□□□□□ -2.56
SWR1
Q05471
YBR223W-A
YBR223W-A
120 nt
-0.93
□□□□□ -2.56
SWR1
Q05471
tT(UGU)Q1
tT(UGU)Q1
76 nt
-0.94
□□□□□ -2.56
SWR1
Q05471
YJL135W
YJL135W
318 nt
-0.94
□□□□□ -2.56
SWR1
Q05471
YBR121C-A
YBR121C-A
159 nt
-0.94
□□□□□ -2.56
SWR1
Q05471
YER138W-A
YER138W-A
105 nt
-0.94
□□□□□ -2.56
SWR1
Q05471
YOR345C
YOR345C
351 nt
-0.94
□□□□□ -2.56
SWR1
Q05471
COG6
YNL041C
2520 nt
-0.95
□□□□□ -2.56
SWR1
Q05471
snR59
snR59
78 nt
-0.95
□□□□□ -2.56
SWR1
Q05471
IRC2
YDR112W
309 nt
-0.95
□□□□□ -2.56
SWR1
Q05471
YAP6
YDR259C
1152 nt
-0.96
□□□□□ -2.56
SWR1
Q05471
YOL106W
YOL106W
354 nt
-0.96
□□□□□ -2.56
SWR1
Q05471
SNU56
YDR240C
1479 nt
-0.97
□□□□□ -2.56
SWR1
Q05471
YJR141W
YJR141W
1044 nt
-0.97
□□□□□ -2.56
SWR1
Q05471
snR33
snR33
183 nt
-0.97
□□□□□ -2.56
SWR1
Q05471
snR36
snR36
182 nt
-0.97
□□□□□ -2.56
SWR1
Q05471
YFR012W-A
YFR012W-A
87 nt
-0.98
□□□□□ -2.57
SWR1
Q05471
YOL160W
YOL160W
342 nt
-0.98
□□□□□ -2.57
SWR1
Q05471
COX7
YMR256C
183 nt
-0.99
□□□□□ -2.57
SWR1
Q05471
snR161
snR161
161 nt
-0.99
□□□□□ -2.57
SWR1
Q05471
RMD6
YEL072W
696 nt
-1
□□□□□ -2.57
SWR1
Q05471
YPL205C
YPL205C
345 nt
-1
□□□□□ -2.57
SWR1
Q05471
ATC1
YDR184C
885 nt
-1.01
□□□□□ -2.57
SWR1
Q05471
YHR054C
YHR054C
1065 nt
-1.01
□□□□□ -2.57
SWR1
Q05471
PSF2
YJL072C
642 nt
-1.02
□□□□□ -2.57
SWR1
Q05471
YLR198C
YLR198C
360 nt
-1.02
□□□□□ -2.57
SWR1
Q05471
UBS1
YBR165W
834 nt
-1.02
□□□□□ -2.57
SWR1
Q05471
YBL008W-A
YBL008W-A
240 nt
-1.03
□□□□□ -2.57
SWR1
Q05471
PBI2
YNL015W
228 nt
-1.03
□□□□□ -2.57
SWR1
Q05471
BLS1
YLR408C
369 nt
-1.04
□□□□□ -2.58
SWR1
Q05471
YDR269C
YDR269C
324 nt
-1.05
□□□□□ -2.58
SWR1
Q05471
SPO21
YOL091W
1830 nt
-1.05
□□□□□ -2.58
SWR1
Q05471
YHL046W-A
YHL046W-A
327 nt
-1.05
□□□□□ -2.58
SWR1
Q05471
YOR248W
YOR248W
303 nt
-1.05
□□□□□ -2.58
SWR1
Q05471
YHR131W-A
YHR131W-A
246 nt
-1.06
□□□□□ -2.58
SWR1
Q05471
GPX1
YKL026C
504 nt
-1.06
□□□□□ -2.58
SWR1
Q05471
DIE2
YGR227W
1578 nt
-1.07
□□□□□ -2.58
SWR1
Q05471
YOR366W
YOR366W
354 nt
-1.07
□□□□□ -2.58
SWR1
Q05471
YLL006W-A
YLL006W-A
177 nt
-1.08
□□□□□ -2.58
SWR1
Q05471
YKL111C
YKL111C
336 nt
-1.09
□□□□□ -2.58
SWR1
Q05471
SEM1
YDR363W-A
270 nt
-1.1
□□□□□ -2.59
SWR1
Q05471
YKL068W-A
YKL068W-A
237 nt
-1.1
□□□□□ -2.59
SWR1
Q05471
YLR163W-A
YLR163W-A
114 nt
-1.1
□□□□□ -2.59
SWR1
Q05471
tN(GUU)Q
tN(GUU)Q
71 nt
-1.11
□□□□□ -2.59
SWR1
Q05471
LIN1
YHR156C
1023 nt
-1.11
□□□□□ -2.59
SWR1
Q05471
YJL120W
YJL120W
324 nt
-1.11
□□□□□ -2.59
SWR1
Q05471
YMR075C-A
YMR075C-A
366 nt
-1.11
□□□□□ -2.59
SWR1
Q05471
YOR020W-A
YOR020W-A
273 nt
-1.12
□□□□□ -2.59
SWR1
Q05471
IRC13
YOR235W
315 nt
-1.12
□□□□□ -2.59
SWR1
Q05471
LRP1
YHR081W
555 nt
-1.13
□□□□□ -2.59
SWR1
Q05471
YIR044C
YIR044C
186 nt
-1.14
□□□□□ -2.59
SWR1
Q05471
ACF4
YJR083C
930 nt
-1.14
□□□□□ -2.59
SWR1
Q05471
YPR096C
YPR096C
303 nt
-1.14
□□□□□ -2.59
SWR1
Q05471
YMR304C-A
YMR304C-A
351 nt
-1.15
□□□□□ -2.59
SWR1
Q05471
IPP1
YBR011C
864 nt
-1.15
□□□□□ -2.59
SWR1
Q05471
YER188C-A
YER188C-A
300 nt
-1.15
□□□□□ -2.59
SWR1
Q05471
YML108W
YML108W
318 nt
-1.15
□□□□□ -2.59
SWR1
Q05471
YOR364W
YOR364W
369 nt
-1.15
□□□□□ -2.59
SWR1
Q05471
YPL261C
YPL261C
309 nt
-1.15
□□□□□ -2.59
SWR1
Q05471
YGR115C
YGR115C
780 nt
-1.16
□□□□□ -2.6
SWR1
Q05471
ECL1
YGR146C
636 nt
-1.16
□□□□□ -2.6
SWR1
Q05471
YLR171W
YLR171W
390 nt
-1.16
□□□□□ -2.6
SWR1
Q05471
CWC23
YGL128C
852 nt
-1.17
□□□□□ -2.6
SWR1
Q05471
DCP1
YOL149W
696 nt
-1.17
□□□□□ -2.6
SWR1
Q05471
POL32
YJR043C
1053 nt
-1.19
□□□□□ -2.6
SWR1
Q05471
YLR287C
YLR287C
1068 nt
-1.2
□□□□□ -2.6
SWR1
Q05471
YHR050W-A
YHR050W-A
171 nt
-1.2
□□□□□ -2.6
SWR1
Q05471
MRPS8
YMR158W
468 nt
-1.2
□□□□□ -2.6
SWR1
Q05471
YNL319W
YNL319W
441 nt
-1.2
□□□□□ -2.6
SWR1
Q05471
RPS30A
YLR287C-A
192 nt
-1.21
□□□□□ -2.6
SWR1
Q05471
YMR307C-A
YMR307C-A
195 nt
-1.21
□□□□□ -2.6
SWR1
Q05471
RRI2
YOL117W
1938 nt
-1.23
□□□□□ -2.61
SWR1
Q05471
IRC16
YPR038W
360 nt
-1.24
□□□□□ -2.61
SWR1
Q05471
SPC24
YMR117C
642 nt
-1.27
□□□□□ -2.61
SWR1
Q05471
YNL146C-A
YNL146C-A
195 nt
-1.28
□□□□□ -2.61
SWR1
Q05471
YKL202W
YKL202W
582 nt
-1.29
□□□□□ -2.62
SWR1
Q05471
YNL067W-B
YNL067W-B
141 nt
-1.29
□□□□□ -2.62
SWR1
Q05471
RPS20
YHL015W
366 nt
-1.3
□□□□□ -2.62
SWR1
Q05471
VAM3
YOR106W
852 nt
-1.3
□□□□□ -2.62
SWR1
Q05471
GRX5
YPL059W
453 nt
-1.3
□□□□□ -2.62
SWR1
Q05471
YOR015W
YOR015W
360 nt
-1.3
□□□□□ -2.62
SWR1
Q05471
YIL071W-A
YIL071W-A
477 nt
-1.31
□□□□□ -2.62
SWR1
Q05471
LOC1
YFR001W
615 nt
-1.32
□□□□□ -2.62
SWR1
Q05471
YGL239C
YGL239C
315 nt
-1.32
□□□□□ -2.62
SWR1
Q05471
YDL185C-A
YDL185C-A
228 nt
-1.33
□□□□□ -2.62
SWR1
Q05471
YGR228W
YGR228W
345 nt
-1.34
□□□□□ -2.62
SWR1
Q05471
ILM1
YJR118C
612 nt
-1.34
□□□□□ -2.62
SWR1
Q05471
YBR099C
YBR099C
384 nt
-1.34
□□□□□ -2.62
SWR1
Q05471
YMR013C-A
YMR013C-A
150 nt
-1.35
□□□□□ -2.62
SWR1
Q05471
PCF11
YDR228C
1881 nt
-1.36
□□□□□ -2.63
SWR1
Q05471
YCR018C-A
YCR018C-A
255 nt
-1.36
□□□□□ -2.63
SWR1
Q05471
snR72
snR72
98 nt
-1.36
□□□□□ -2.63
SWR1
Q05471
YHR138C
YHR138C
345 nt
-1.37
□□□□□ -2.63
SWR1
Q05471
YOL029C
YOL029C
606 nt
-1.37
□□□□□ -2.63
SWR1
Q05471
tA(UGC)Q
tA(UGC)Q
76 nt
-1.38
□□□□□ -2.63
SWR1
Q05471
BUD26
YDR241W
288 nt
-1.38
□□□□□ -2.63
SWR1
Q05471
SRB7
YDR308C
423 nt
-1.38
□□□□□ -2.63
SWR1
Q05471
RPS25B
YLR333C
327 nt
-1.38
□□□□□ -2.63
SWR1
Q05471
ATG31
YDR022C
591 nt
-1.39
□□□□□ -2.63
SWR1
Q05471
YDR220C
YDR220C
294 nt
-1.39
□□□□□ -2.63
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Retrieved 100 of 7,029 protein–RNA pairs in 25.7 ms