Protein–RNA interactions for Protein: Q03880

PKR1, V-type ATPase assembly factor PKR1, yeast

Known RBP Predictions only

Length 122 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	Q03880	YBL008W-A	YBL008W-A	240 nt		-0.21	□□□□□ -2.44
PKR1	Q03880	RPB10	YOR210W	213 nt		-0.21	□□□□□ -2.44
PKR1	Q03880	LEE1	YPL054W	906 nt		-0.21	□□□□□ -2.44
PKR1	Q03880	YPL261C	YPL261C	309 nt		-0.21	□□□□□ -2.44
PKR1	Q03880	YPR160W-A	YPR160W-A	81 nt		-0.21	□□□□□ -2.44
PKR1	Q03880	snR45	snR45	172 nt		-0.21	□□□□□ -2.44
PKR1	Q03880	YFR012W-A	YFR012W-A	87 nt		-0.22	□□□□□ -2.44
PKR1	Q03880	MND1	YGL183C	660 nt		-0.22	□□□□□ -2.44
PKR1	Q03880	HAL9	YOL089C	3093 nt		-0.23	□□□□□ -2.45
PKR1	Q03880	ULI1	YFR026C	510 nt		-0.23	□□□□□ -2.45
PKR1	Q03880	YGL230C	YGL230C	444 nt		-0.23	□□□□□ -2.45
PKR1	Q03880	COX5B	YIL111W	456 nt		-0.23	□□□□□ -2.45
PKR1	Q03880	YAP6	YDR259C	1152 nt		-0.24	□□□□□ -2.45
PKR1	Q03880	YDR371C-A	YDR371C-A	105 nt		-0.24	□□□□□ -2.45
PKR1	Q03880	YER135C	YER135C	393 nt		-0.24	□□□□□ -2.45
PKR1	Q03880	AFB1	YLR040C	675 nt		-0.24	□□□□□ -2.45
PKR1	Q03880	YDL187C	YDL187C	330 nt		-0.26	□□□□□ -2.45
PKR1	Q03880	YIR044C	YIR044C	186 nt		-0.26	□□□□□ -2.45
PKR1	Q03880	snR72	snR72	98 nt		-0.27	□□□□□ -2.45
PKR1	Q03880	PAA1	YDR071C	576 nt		-0.27	□□□□□ -2.45
PKR1	Q03880	YAL067W-A	YAL067W-A	228 nt		-0.27	□□□□□ -2.45
PKR1	Q03880	UBS1	YBR165W	834 nt		-0.27	□□□□□ -2.45
PKR1	Q03880	HUR1	YGL168W	333 nt		-0.28	□□□□□ -2.45
PKR1	Q03880	RPS26A	YGL189C	360 nt		-0.28	□□□□□ -2.45
PKR1	Q03880	YKL202W	YKL202W	582 nt		-0.28	□□□□□ -2.45
PKR1	Q03880	PBI2	YNL015W	228 nt		-0.28	□□□□□ -2.45
PKR1	Q03880	YER175W-A	YER175W-A	165 nt		-0.29	□□□□□ -2.46
PKR1	Q03880	EMC4	YGL231C	573 nt		-0.29	□□□□□ -2.46
PKR1	Q03880	YOR186C-A	YOR186C-A	210 nt		-0.29	□□□□□ -2.46
PKR1	Q03880	YBR206W	YBR206W	324 nt		-0.29	□□□□□ -2.46
PKR1	Q03880	ECM9	YKR004C	1134 nt		-0.3	□□□□□ -2.46
PKR1	Q03880	YLR399W-A	YLR399W-A	105 nt		-0.3	□□□□□ -2.46
PKR1	Q03880	YMR321C	YMR321C	318 nt		-0.3	□□□□□ -2.46
PKR1	Q03880	SPO21	YOL091W	1830 nt		-0.31	□□□□□ -2.46
PKR1	Q03880	YIL066W-A	YIL066W-A	444 nt		-0.31	□□□□□ -2.46
PKR1	Q03880	NFU1	YKL040C	771 nt		-0.31	□□□□□ -2.46
PKR1	Q03880	SNU56	YDR240C	1479 nt		-0.32	□□□□□ -2.46
PKR1	Q03880	MAM33	YIL070C	801 nt		-0.32	□□□□□ -2.46
PKR1	Q03880	YNL146W	YNL146W	303 nt		-0.32	□□□□□ -2.46
PKR1	Q03880	YOL029C	YOL029C	606 nt		-0.32	□□□□□ -2.46
PKR1	Q03880	YJR087W	YJR087W	351 nt		-0.33	□□□□□ -2.46
PKR1	Q03880	DCP1	YOL149W	696 nt		-0.33	□□□□□ -2.46
PKR1	Q03880	YOR345C	YOR345C	351 nt		-0.33	□□□□□ -2.46
PKR1	Q03880	SOV1	YMR066W	2697 nt		-0.33	□□□□□ -2.46
PKR1	Q03880	YML108W	YML108W	318 nt		-0.34	□□□□□ -2.46
PKR1	Q03880	IPP1	YBR011C	864 nt		-0.34	□□□□□ -2.46
PKR1	Q03880	YDR210W	YDR210W	228 nt		-0.35	□□□□□ -2.47
PKR1	Q03880	QCR9	YGR183C	201 nt		-0.35	□□□□□ -2.47
PKR1	Q03880	YAR053W	YAR053W	297 nt		-0.35	□□□□□ -2.47
PKR1	Q03880	YGR025W	YGR025W	303 nt		-0.36	□□□□□ -2.47
PKR1	Q03880	YKL136W	YKL136W	399 nt		-0.36	□□□□□ -2.47
PKR1	Q03880	COY1	YKL179C	2040 nt		-0.37	□□□□□ -2.47
PKR1	Q03880	YNL211C	YNL211C	261 nt		-0.37	□□□□□ -2.47
PKR1	Q03880	snR51	snR51	107 nt		-0.37	□□□□□ -2.47
PKR1	Q03880	NNF2	YGR089W	2811 nt		-0.37	□□□□□ -2.47
PKR1	Q03880	YHL046W-A	YHL046W-A	327 nt		-0.38	□□□□□ -2.47
PKR1	Q03880	YPL182C	YPL182C	384 nt		-0.38	□□□□□ -2.47
PKR1	Q03880	PTP2	YOR208W	2253 nt		-0.38	□□□□□ -2.47
PKR1	Q03880	snR8	snR8	190 nt		-0.39	□□□□□ -2.47
PKR1	Q03880	YJR011C	YJR011C	786 nt		-0.39	□□□□□ -2.47
PKR1	Q03880	YIL029C	YIL029C	429 nt		-0.4	□□□□□ -2.47
PKR1	Q03880	YKL023C-A	YKL023C-A	228 nt		-0.4	□□□□□ -2.47
PKR1	Q03880	YKL044W	YKL044W	321 nt		-0.4	□□□□□ -2.47
PKR1	Q03880	MRPS8	YMR158W	468 nt		-0.4	□□□□□ -2.47
PKR1	Q03880	NIP1	YMR309C	2439 nt		-0.4	□□□□□ -2.47
PKR1	Q03880	YKU70	YMR284W	1809 nt		-0.41	□□□□□ -2.47
PKR1	Q03880	TIM13	YGR181W	318 nt		-0.41	□□□□□ -2.48
PKR1	Q03880	RPS20	YHL015W	366 nt		-0.41	□□□□□ -2.48
PKR1	Q03880	YLR171W	YLR171W	390 nt		-0.41	□□□□□ -2.48
PKR1	Q03880	YOR032W-A	YOR032W-A	201 nt		-0.42	□□□□□ -2.48
PKR1	Q03880	snR128	snR128	126 nt		-0.42	□□□□□ -2.48
PKR1	Q03880	YCR001W	YCR001W	315 nt		-0.44	□□□□□ -2.48
PKR1	Q03880	YCR100C	YCR100C	951 nt		-0.44	□□□□□ -2.48
PKR1	Q03880	TFB5	YDR079C-A	219 nt		-0.44	□□□□□ -2.48
PKR1	Q03880	SDH7	YDR511W	402 nt		-0.44	□□□□□ -2.48
PKR1	Q03880	SBH2	YER019C-A	267 nt		-0.44	□□□□□ -2.48
PKR1	Q03880	tN(GUU)Q	tN(GUU)Q	71 nt		-0.46	□□□□□ -2.48
PKR1	Q03880	NIP100	YPL174C	2607 nt		-0.47	□□□□□ -2.48
PKR1	Q03880	BUL2	YML111W	2763 nt		-0.47	□□□□□ -2.49
PKR1	Q03880	YOL038C-A	YOL038C-A	96 nt		-0.48	□□□□□ -2.49
PKR1	Q03880	YEL073C	YEL073C	324 nt		-0.49	□□□□□ -2.49
PKR1	Q03880	TSC3	YBR058C-A	243 nt		-0.49	□□□□□ -2.49
PKR1	Q03880	HMLALPHA2	YCL067C	633 nt		-0.5	□□□□□ -2.49
PKR1	Q03880	MATALPHA2	YCR039C	633 nt		-0.5	□□□□□ -2.49
PKR1	Q03880	ATG31	YDR022C	591 nt		-0.5	□□□□□ -2.49
PKR1	Q03880	YAL066W	YAL066W	309 nt		-0.5	□□□□□ -2.49
PKR1	Q03880	YLR101C	YLR101C	396 nt		-0.5	□□□□□ -2.49
PKR1	Q03880	RAD61	YDR014W	1944 nt		-0.5	□□□□□ -2.49
PKR1	Q03880	YDL185C-A	YDL185C-A	228 nt		-0.51	□□□□□ -2.49
PKR1	Q03880	YGR164W	YGR164W	336 nt		-0.51	□□□□□ -2.49
PKR1	Q03880	YJR141W	YJR141W	1044 nt		-0.51	□□□□□ -2.49
PKR1	Q03880	SVS1	YPL163C	783 nt		-0.51	□□□□□ -2.49
PKR1	Q03880	RPF1	YHR088W	888 nt		-0.52	□□□□□ -2.49
PKR1	Q03880	BER1	YLR412W	825 nt		-0.53	□□□□□ -2.49
PKR1	Q03880	YJL007C	YJL007C	315 nt		-0.54	□□□□□ -2.5
PKR1	Q03880	SEM1	YDR363W-A	270 nt		-0.55	□□□□□ -2.5
PKR1	Q03880	YHR131W-A	YHR131W-A	246 nt		-0.55	□□□□□ -2.5
PKR1	Q03880	YJL020W-A	YJL020W-A	258 nt		-0.55	□□□□□ -2.5
PKR1	Q03880	PRP39	YML046W	1890 nt		-0.55	□□□□□ -2.5
PKR1	Q03880	SEC10	YLR166C	2616 nt		-0.56	□□□□□ -2.5

Retrieved 100 of 7,029 protein–RNA pairs in 98.2 ms