Protein–RNA interactions for Protein: P53905

LSM7, U6 snRNA-associated Sm-like protein LSm7, yeastyeast

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM7P53905 YMR160WYMR160W 2451 nt0.29□□□□□ -2.36
LSM7P53905 YSP1YHR155W 3687 nt0.29□□□□□ -2.36
LSM7P53905 YER084W-AYER084W-A 513 nt0.29□□□□□ -2.36
LSM7P53905 OLI1Q0130 231 nt0.29□□□□□ -2.36
LSM7P53905 YHR125WYHR125W 306 nt0.29□□□□□ -2.36
LSM7P53905 YLR287CYLR287C 1068 nt0.29□□□□□ -2.36
LSM7P53905 ZEO1YOL109W 342 nt0.29□□□□□ -2.36
LSM7P53905 MCM10YIL150C 1716 nt0.29□□□□□ -2.36
LSM7P53905 INP2YMR163C 2118 nt0.29□□□□□ -2.36
LSM7P53905 INA22YIR024C 651 nt0.28□□□□□ -2.36
LSM7P53905 YPL185WYPL185W 396 nt0.28□□□□□ -2.36
LSM7P53905 SBH1YER087C-B 249 nt0.27□□□□□ -2.37
LSM7P53905 YHL041WYHL041W 450 nt0.27□□□□□ -2.37
LSM7P53905 ABF2YMR072W 552 nt0.27□□□□□ -2.37
LSM7P53905 YPL229WYPL229W 621 nt0.27□□□□□ -2.37
LSM7P53905 FMP27YLR454W 7887 nt0.26□□□□□ -2.37
LSM7P53905 YAP6YDR259C 1152 nt0.26□□□□□ -2.37
LSM7P53905 MAM33YIL070C 801 nt0.26□□□□□ -2.37
LSM7P53905 YJL127W-AYJL127W-A 117 nt0.26□□□□□ -2.37
LSM7P53905 STE18YJR086W 333 nt0.26□□□□□ -2.37
LSM7P53905 AIM29YKR074W 468 nt0.26□□□□□ -2.37
LSM7P53905 YNL058CYNL058C 951 nt0.26□□□□□ -2.37
LSM7P53905 YBR206WYBR206W 324 nt0.26□□□□□ -2.37
LSM7P53905 FYV10YIL097W 1551 nt0.26□□□□□ -2.37
LSM7P53905 PTP2YOR208W 2253 nt0.25□□□□□ -2.37
LSM7P53905 RPS20YHL015W 366 nt0.25□□□□□ -2.37
LSM7P53905 YOR072W-AYOR072W-A 249 nt0.25□□□□□ -2.37
LSM7P53905 PET111YMR257C 2403 nt0.25□□□□□ -2.37
LSM7P53905 YHR130CYHR130C 336 nt0.24□□□□□ -2.37
LSM7P53905 YJR011CYJR011C 786 nt0.24□□□□□ -2.37
LSM7P53905 YOR192C-CYOR192C-C 237 nt0.24□□□□□ -2.37
LSM7P53905 DIE2YGR227W 1578 nt0.23□□□□□ -2.37
LSM7P53905 PAU12YGR294W 363 nt0.23□□□□□ -2.37
LSM7P53905 PAA1YDR071C 576 nt0.21□□□□□ -2.38
LSM7P53905 YKL083WYKL083W 615 nt0.21□□□□□ -2.38
LSM7P53905 YOR029WYOR029W 336 nt0.21□□□□□ -2.38
LSM7P53905 NIP100YPL174C 2607 nt0.21□□□□□ -2.38
LSM7P53905 SPO21YOL091W 1830 nt0.2□□□□□ -2.38
LSM7P53905 ASE1YOR058C 2658 nt0.2□□□□□ -2.38
LSM7P53905 ATG31YDR022C 591 nt0.2□□□□□ -2.38
LSM7P53905 VIK1YPL253C 1944 nt0.2□□□□□ -2.38
LSM7P53905 YNR025CYNR025C 360 nt0.19□□□□□ -2.38
LSM7P53905 snR54snR54 86 nt0.19□□□□□ -2.38
LSM7P53905 UTP20YBL004W 7482 nt0.19□□□□□ -2.38
LSM7P53905 BEM3YPL115C 3387 nt0.18□□□□□ -2.38
LSM7P53905 YFR012W-AYFR012W-A 87 nt0.18□□□□□ -2.38
LSM7P53905 MLP1YKR095W 5628 nt0.18□□□□□ -2.38
LSM7P53905 BI2Q0110 1272 nt0.17□□□□□ -2.38
LSM7P53905 COX5BYIL111W 456 nt0.17□□□□□ -2.38
LSM7P53905 YNL054W-BYNL054W-B 5250 nt0.17□□□□□ -2.38
LSM7P53905 ULP2YIL031W 3105 nt0.16□□□□□ -2.38
LSM7P53905 YAR047CYAR047C 321 nt0.16□□□□□ -2.38
LSM7P53905 YPR160W-AYPR160W-A 81 nt0.16□□□□□ -2.38
LSM7P53905 CBS1YDL069C 690 nt0.15□□□□□ -2.39
LSM7P53905 YGR174W-AYGR174W-A 87 nt0.15□□□□□ -2.39
LSM7P53905 YPR002C-AYPR002C-A 198 nt0.15□□□□□ -2.39
LSM7P53905 YOR192C-BYOR192C-B 5313 nt0.15□□□□□ -2.39
LSM7P53905 SEC8YPR055W 3198 nt0.14□□□□□ -2.39
LSM7P53905 PCF11YDR228C 1881 nt0.14□□□□□ -2.39
LSM7P53905 ECL1YGR146C 636 nt0.14□□□□□ -2.39
LSM7P53905 YML007C-AYML007C-A 111 nt0.14□□□□□ -2.39
LSM7P53905 YNL211CYNL211C 261 nt0.14□□□□□ -2.39
LSM7P53905 YOL013W-AYOL013W-A 192 nt0.14□□□□□ -2.39
LSM7P53905 PRP5YBR237W 2550 nt0.14□□□□□ -2.39
LSM7P53905 OST4YDL232W 111 nt0.13□□□□□ -2.39
LSM7P53905 YLR171WYLR171W 390 nt0.13□□□□□ -2.39
LSM7P53905 YNL122CYNL122C 348 nt0.13□□□□□ -2.39
LSM7P53905 ISF1YMR081C 1017 nt0.12□□□□□ -2.39
LSM7P53905 TRS65YGR166W 1683 nt0.11□□□□□ -2.39
LSM7P53905 YHL046W-AYHL046W-A 327 nt0.11□□□□□ -2.39
LSM7P53905 YAL067W-AYAL067W-A 228 nt0.11□□□□□ -2.39
LSM7P53905 YLR399W-AYLR399W-A 105 nt0.11□□□□□ -2.39
LSM7P53905 YMR321CYMR321C 318 nt0.11□□□□□ -2.39
LSM7P53905 PRP42YDR235W 1635 nt0.11□□□□□ -2.39
LSM7P53905 HAL9YOL089C 3093 nt0.11□□□□□ -2.39
LSM7P53905 YER006C-AYER006C-A 318 nt0.1□□□□□ -2.39
LSM7P53905 YGR290WYGR290W 444 nt0.1□□□□□ -2.39
LSM7P53905 FYV7YLR068W 456 nt0.09□□□□□ -2.4
LSM7P53905 YLR101CYLR101C 396 nt0.09□□□□□ -2.4
LSM7P53905 YOR011W-AYOR011W-A 207 nt0.09□□□□□ -2.4
LSM7P53905 AI1Q0050 2505 nt0.08□□□□□ -2.4
LSM7P53905 YDR426CYDR426C 378 nt0.08□□□□□ -2.4
LSM7P53905 YOR053WYOR053W 342 nt0.08□□□□□ -2.4
LSM7P53905 MLP2YIL149C 5040 nt0.08□□□□□ -2.4
LSM7P53905 BIR1YJR089W 2865 nt0.07□□□□□ -2.4
LSM7P53905 HMRA2YCR096C 360 nt0.07□□□□□ -2.4
LSM7P53905 MRPL50YNR022C 420 nt0.07□□□□□ -2.4
LSM7P53905 RPS30BYOR182C 192 nt0.07□□□□□ -2.4
LSM7P53905 YKL145W-AYKL145W-A 93 nt0.06□□□□□ -2.4
LSM7P53905 YLR456WYLR456W 615 nt0.06□□□□□ -2.4
LSM7P53905 YBL100W-BYBL100W-B 5313 nt0.05□□□□□ -2.4
LSM7P53905 snR41snR41 95 nt0.05□□□□□ -2.4
LSM7P53905 ORC3YLL004W 1851 nt0.04□□□□□ -2.4
LSM7P53905 COX12YLR038C 252 nt0.04□□□□□ -2.4
LSM7P53905 TOM22YNL131W 459 nt0.04□□□□□ -2.4
LSM7P53905 SGF11YPL047W 300 nt0.04□□□□□ -2.4
LSM7P53905 ESP1YGR098C 4893 nt0.04□□□□□ -2.4
LSM7P53905 YDR371C-AYDR371C-A 105 nt0.03□□□□□ -2.4
LSM7P53905 YOR345CYOR345C 351 nt0.03□□□□□ -2.4
LSM7P53905 YPL225WYPL225W 441 nt0.03□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 38.2 ms