Protein–RNA interactions for Protein: P53599

SSK2, MAP kinase kinase kinase SSK2, yeast

Predictions only

Length 1,579 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	P53599	YJL077W-A	YJL077W-A	87 nt		-1.76	□□□□□ -2.69
SSK2	P53599	YBR099C	YBR099C	384 nt		-1.76	□□□□□ -2.69
SSK2	P53599	tN(GUU)Q	tN(GUU)Q	71 nt		-1.77	□□□□□ -2.69
SSK2	P53599	YIL089W	YIL089W	618 nt		-1.77	□□□□□ -2.69
SSK2	P53599	YKE2	YLR200W	345 nt		-1.77	□□□□□ -2.69
SSK2	P53599	YPL119C-A	YPL119C-A	264 nt		-1.77	□□□□□ -2.69
SSK2	P53599	LSO2	YGR169C-A	279 nt		-1.78	□□□□□ -2.69
SSK2	P53599	tY(GUA)Q	tY(GUA)Q	84 nt		-1.78	□□□□□ -2.69
SSK2	P53599	FAR3	YMR052W	615 nt		-1.78	□□□□□ -2.69
SSK2	P53599	YLR198C	YLR198C	360 nt		-1.79	□□□□□ -2.7
SSK2	P53599	YBL062W	YBL062W	381 nt		-1.79	□□□□□ -2.7
SSK2	P53599	YHL046W-A	YHL046W-A	327 nt		-1.8	□□□□□ -2.7
SSK2	P53599	PCF11	YDR228C	1881 nt		-1.8	□□□□□ -2.7
SSK2	P53599	YDL152W	YDL152W	366 nt		-1.81	□□□□□ -2.7
SSK2	P53599	RUB1	YDR139C	234 nt		-1.81	□□□□□ -2.7
SSK2	P53599	YER046W-A	YER046W-A	330 nt		-1.81	□□□□□ -2.7
SSK2	P53599	YJL182C	YJL182C	318 nt		-1.81	□□□□□ -2.7
SSK2	P53599	YMR158C-A	YMR158C-A	138 nt		-1.81	□□□□□ -2.7
SSK2	P53599	ZIP2	YGL249W	2115 nt		-1.81	□□□□□ -2.7
SSK2	P53599	YAP6	YDR259C	1152 nt		-1.81	□□□□□ -2.7
SSK2	P53599	PAU9	YBL108C-A	129 nt		-1.81	□□□□□ -2.7
SSK2	P53599	MRPL31	YKL138C	396 nt		-1.82	□□□□□ -2.7
SSK2	P53599	YOR161W-A	YOR161W-A	81 nt		-1.82	□□□□□ -2.7
SSK2	P53599	YJL114W	YJL114W	681 nt		-1.83	□□□□□ -2.7
SSK2	P53599	YGL182C	YGL182C	324 nt		-1.84	□□□□□ -2.7
SSK2	P53599	APQ12	YIL040W	417 nt		-1.84	□□□□□ -2.7
SSK2	P53599	YMR254C	YMR254C	309 nt		-1.84	□□□□□ -2.7
SSK2	P53599	SNU13	YEL026W	381 nt		-1.86	□□□□□ -2.71
SSK2	P53599	YKL065W-A	YKL065W-A	222 nt		-1.86	□□□□□ -2.71
SSK2	P53599	YLR271W	YLR271W	825 nt		-1.86	□□□□□ -2.71
SSK2	P53599	YMR290W-A	YMR290W-A	348 nt		-1.86	□□□□□ -2.71
SSK2	P53599	YAL069W	YAL069W	315 nt		-1.87	□□□□□ -2.71
SSK2	P53599	YOL160W	YOL160W	342 nt		-1.88	□□□□□ -2.71
SSK2	P53599	SUT2	YPR009W	807 nt		-1.88	□□□□□ -2.71
SSK2	P53599	YOL029C	YOL029C	606 nt		-1.89	□□□□□ -2.71
SSK2	P53599	YBR126W-B	YBR126W-B	144 nt		-1.89	□□□□□ -2.71
SSK2	P53599	YDR008C	YDR008C	351 nt		-1.89	□□□□□ -2.71
SSK2	P53599	YML047W-A	YML047W-A	366 nt		-1.89	□□□□□ -2.71
SSK2	P53599	RPS10B	YMR230W	318 nt		-1.89	□□□□□ -2.71
SSK2	P53599	YMR153C-A	YMR153C-A	336 nt		-1.9	□□□□□ -2.71
SSK2	P53599	YPR074W-A	YPR074W-A	171 nt		-1.9	□□□□□ -2.71
SSK2	P53599	RRI2	YOL117W	1938 nt		-1.91	□□□□□ -2.72
SSK2	P53599	YER076W-A	YER076W-A	348 nt		-1.92	□□□□□ -2.72
SSK2	P53599	PSF2	YJL072C	642 nt		-1.92	□□□□□ -2.72
SSK2	P53599	YML100W-A	YML100W-A	174 nt		-1.92	□□□□□ -2.72
SSK2	P53599	YCR024C-B	YCR024C-B	267 nt		-1.93	□□□□□ -2.72
SSK2	P53599	YJL032W	YJL032W	315 nt		-1.93	□□□□□ -2.72
SSK2	P53599	YCR100C	YCR100C	951 nt		-1.94	□□□□□ -2.72
SSK2	P53599	YGL006W-A	YGL006W-A	111 nt		-1.94	□□□□□ -2.72
SSK2	P53599	YHL041W	YHL041W	450 nt		-1.94	□□□□□ -2.72
SSK2	P53599	YPL182C	YPL182C	384 nt		-1.94	□□□□□ -2.72
SSK2	P53599	YJL135W	YJL135W	318 nt		-1.96	□□□□□ -2.72
SSK2	P53599	YLR146W-A	YLR146W-A	189 nt		-1.96	□□□□□ -2.72
SSK2	P53599	SDS22	YKL193C	1017 nt		-1.98	□□□□□ -2.73
SSK2	P53599	PBI2	YNL015W	228 nt		-1.98	□□□□□ -2.73
SSK2	P53599	LIN1	YHR156C	1023 nt		-1.99	□□□□□ -2.73
SSK2	P53599	YGR204C-A	YGR204C-A	114 nt		-2	□□□□□ -2.73
SSK2	P53599	YIL002W-A	YIL002W-A	210 nt		-2	□□□□□ -2.73
SSK2	P53599	YLR171W	YLR171W	390 nt		-2	□□□□□ -2.73
SSK2	P53599	YMR307C-A	YMR307C-A	195 nt		-2	□□□□□ -2.73
SSK2	P53599	YNL067W-A	YNL067W-A	147 nt		-2	□□□□□ -2.73
SSK2	P53599	YER084W-A	YER084W-A	513 nt		-2.01	□□□□□ -2.73
SSK2	P53599	YJL020W-A	YJL020W-A	258 nt		-2.01	□□□□□ -2.73
SSK2	P53599	PAN3	YKL025C	2040 nt		-2.01	□□□□□ -2.73
SSK2	P53599	YDR543C	YDR543C	300 nt		-2.02	□□□□□ -2.73
SSK2	P53599	YAL068W-A	YAL068W-A	255 nt		-2.02	□□□□□ -2.73
SSK2	P53599	YLR154W-F	YLR154W-F	141 nt		-2.02	□□□□□ -2.73
SSK2	P53599	YBR051W	YBR051W	351 nt		-2.02	□□□□□ -2.73
SSK2	P53599	YPR099C	YPR099C	357 nt		-2.02	□□□□□ -2.73
SSK2	P53599	YBL039C-A	YBL039C-A	84 nt		-2.02	□□□□□ -2.73
SSK2	P53599	15S_rRNA	15S_rRNA	1649 nt		-2.03	□□□□□ -2.73
SSK2	P53599	YKL068W-A	YKL068W-A	237 nt		-2.03	□□□□□ -2.73
SSK2	P53599	VAM3	YOR106W	852 nt		-2.03	□□□□□ -2.73
SSK2	P53599	YHR130C	YHR130C	336 nt		-2.05	□□□□□ -2.74
SSK2	P53599	YPL068C	YPL068C	882 nt		-2.05	□□□□□ -2.74
SSK2	P53599	YER138W-A	YER138W-A	105 nt		-2.06	□□□□□ -2.74
SSK2	P53599	RPL29	YFR032C-A	180 nt		-2.06	□□□□□ -2.74
SSK2	P53599	LRP1	YHR081W	555 nt		-2.06	□□□□□ -2.74
SSK2	P53599	YBL008W-A	YBL008W-A	240 nt		-2.06	□□□□□ -2.74
SSK2	P53599	snR49	snR49	165 nt		-2.06	□□□□□ -2.74
SSK2	P53599	GOS1	YHL031C	672 nt		-2.06	□□□□□ -2.74
SSK2	P53599	BLI1	YKL061W	342 nt		-2.06	□□□□□ -2.74
SSK2	P53599	YML108W	YML108W	318 nt		-2.07	□□□□□ -2.74
SSK2	P53599	AGA2	YGL032C	264 nt		-2.09	□□□□□ -2.74
SSK2	P53599	YGL042C	YGL042C	306 nt		-2.09	□□□□□ -2.74
SSK2	P53599	SMD2	YLR275W	333 nt		-2.09	□□□□□ -2.74
SSK2	P53599	YPR142C	YPR142C	564 nt		-2.09	□□□□□ -2.74
SSK2	P53599	YHL012W	YHL012W	1482 nt		-2.09	□□□□□ -2.74
SSK2	P53599	RPS20	YHL015W	366 nt		-2.1	□□□□□ -2.75
SSK2	P53599	ATP20	YPR020W	348 nt		-2.1	□□□□□ -2.75
SSK2	P53599	SDH7	YDR511W	402 nt		-2.1	□□□□□ -2.75
SSK2	P53599	PMP2	YEL017C-A	132 nt		-2.1	□□□□□ -2.75
SSK2	P53599	YIR044C	YIR044C	186 nt		-2.11	□□□□□ -2.75
SSK2	P53599	YDL185C-A	YDL185C-A	228 nt		-2.12	□□□□□ -2.75
SSK2	P53599	snR79	snR79	84 nt		-2.13	□□□□□ -2.75
SSK2	P53599	YER158W-A	YER158W-A	216 nt		-2.13	□□□□□ -2.75
SSK2	P53599	YKL115C	YKL115C	393 nt		-2.13	□□□□□ -2.75
SSK2	P53599	LOC1	YFR001W	615 nt		-2.15	□□□□□ -2.75
SSK2	P53599	YCR018C-A	YCR018C-A	255 nt		-2.16	□□□□□ -2.76
SSK2	P53599	DCP1	YOL149W	696 nt		-2.17	□□□□□ -2.76

Retrieved 100 of 7,029 protein–RNA pairs in 50.2 ms