Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 NFU1YKL040C 771 nt-0.24□□□□□ -2.45
VPS55P47111 YOR248WYOR248W 303 nt-0.24□□□□□ -2.45
VPS55P47111 CSE1YGL238W 2883 nt-0.25□□□□□ -2.45
VPS55P47111 snR72snR72 98 nt-0.25□□□□□ -2.45
VPS55P47111 MAM33YIL070C 801 nt-0.25□□□□□ -2.45
VPS55P47111 COX5BYIL111W 456 nt-0.25□□□□□ -2.45
VPS55P47111 HAL9YOL089C 3093 nt-0.26□□□□□ -2.45
VPS55P47111 RSM23YGL129C 1353 nt-0.26□□□□□ -2.45
VPS55P47111 YDR029WYDR029W 315 nt-0.26□□□□□ -2.45
VPS55P47111 EMC4YGL231C 573 nt-0.26□□□□□ -2.45
VPS55P47111 YNL211CYNL211C 261 nt-0.26□□□□□ -2.45
VPS55P47111 EFR3YMR212C 2349 nt-0.26□□□□□ -2.45
VPS55P47111 YKL136WYKL136W 399 nt-0.27□□□□□ -2.45
VPS55P47111 YLR217WYLR217W 324 nt-0.27□□□□□ -2.45
VPS55P47111 YMR290W-AYMR290W-A 348 nt-0.27□□□□□ -2.45
VPS55P47111 YBR063CYBR063C 1215 nt-0.27□□□□□ -2.45
VPS55P47111 MRPL32YCR003W 552 nt-0.28□□□□□ -2.45
VPS55P47111 snR5snR5 204 nt-0.28□□□□□ -2.45
VPS55P47111 YGL015CYGL015C 393 nt-0.28□□□□□ -2.45
VPS55P47111 YOR186C-AYOR186C-A 210 nt-0.28□□□□□ -2.45
VPS55P47111 RAD34YDR314C 2079 nt-0.28□□□□□ -2.45
VPS55P47111 tN(GUU)QtN(GUU)Q 71 nt-0.29□□□□□ -2.46
VPS55P47111 AFB1YLR040C 675 nt-0.29□□□□□ -2.46
VPS55P47111 YDL185C-AYDL185C-A 228 nt-0.3□□□□□ -2.46
VPS55P47111 BUD26YDR241W 288 nt-0.3□□□□□ -2.46
VPS55P47111 YKL023C-AYKL023C-A 228 nt-0.3□□□□□ -2.46
VPS55P47111 YAL067W-AYAL067W-A 228 nt-0.3□□□□□ -2.46
VPS55P47111 YOL160WYOL160W 342 nt-0.3□□□□□ -2.46
VPS55P47111 YPL185WYPL185W 396 nt-0.3□□□□□ -2.46
VPS55P47111 NIP1YMR309C 2439 nt-0.3□□□□□ -2.46
VPS55P47111 YKU70YMR284W 1809 nt-0.31□□□□□ -2.46
VPS55P47111 YAP6YDR259C 1152 nt-0.31□□□□□ -2.46
VPS55P47111 DCP1YOL149W 696 nt-0.31□□□□□ -2.46
VPS55P47111 IPP1YBR011C 864 nt-0.31□□□□□ -2.46
VPS55P47111 snR8snR8 190 nt-0.32□□□□□ -2.46
VPS55P47111 HUR1YGL168W 333 nt-0.32□□□□□ -2.46
VPS55P47111 YGR164WYGR164W 336 nt-0.32□□□□□ -2.46
VPS55P47111 YGR228WYGR228W 345 nt-0.32□□□□□ -2.46
VPS55P47111 ECM9YKR004C 1134 nt-0.32□□□□□ -2.46
VPS55P47111 YML108WYML108W 318 nt-0.32□□□□□ -2.46
VPS55P47111 YPR039WYPR039W 336 nt-0.32□□□□□ -2.46
VPS55P47111 NNF2YGR089W 2811 nt-0.33□□□□□ -2.46
VPS55P47111 YGL239CYGL239C 315 nt-0.33□□□□□ -2.46
VPS55P47111 YJR011CYJR011C 786 nt-0.33□□□□□ -2.46
VPS55P47111 YLR171WYLR171W 390 nt-0.33□□□□□ -2.46
VPS55P47111 YOL029CYOL029C 606 nt-0.33□□□□□ -2.46
VPS55P47111 ILM1YJR118C 612 nt-0.34□□□□□ -2.46
VPS55P47111 YMR254CYMR254C 309 nt-0.34□□□□□ -2.46
VPS55P47111 PAA1YDR071C 576 nt-0.35□□□□□ -2.47
VPS55P47111 YEL073CYEL073C 324 nt-0.35□□□□□ -2.47
VPS55P47111 YBL107W-AYBL107W-A 105 nt-0.35□□□□□ -2.47
VPS55P47111 RAD61YDR014W 1944 nt-0.35□□□□□ -2.47
VPS55P47111 YPL261CYPL261C 309 nt-0.36□□□□□ -2.47
VPS55P47111 snR46snR46 197 nt-0.36□□□□□ -2.47
VPS55P47111 YLR399W-AYLR399W-A 105 nt-0.37□□□□□ -2.47
VPS55P47111 SCEIQ0160 708 nt-0.38□□□□□ -2.47
VPS55P47111 YHL046W-AYHL046W-A 327 nt-0.38□□□□□ -2.47
VPS55P47111 YIL066W-AYIL066W-A 444 nt-0.38□□□□□ -2.47
VPS55P47111 PBI2YNL015W 228 nt-0.38□□□□□ -2.47
VPS55P47111 APQ13YJL075C 417 nt-0.39□□□□□ -2.47
VPS55P47111 SPO21YOL091W 1830 nt-0.39□□□□□ -2.47
VPS55P47111 snR128snR128 126 nt-0.4□□□□□ -2.47
VPS55P47111 POP7YBR167C 423 nt-0.4□□□□□ -2.47
VPS55P47111 snR51snR51 107 nt-0.4□□□□□ -2.47
VPS55P47111 DIE2YGR227W 1578 nt-0.41□□□□□ -2.48
VPS55P47111 SBH2YER019C-A 267 nt-0.42□□□□□ -2.48
VPS55P47111 MND1YGL183C 660 nt-0.42□□□□□ -2.48
VPS55P47111 YIR044CYIR044C 186 nt-0.42□□□□□ -2.48
VPS55P47111 UBS1YBR165W 834 nt-0.42□□□□□ -2.48
VPS55P47111 NIP100YPL174C 2607 nt-0.42□□□□□ -2.48
VPS55P47111 snR9snR9 187 nt-0.43□□□□□ -2.48
VPS55P47111 SEM1YDR363W-A 270 nt-0.43□□□□□ -2.48
VPS55P47111 YGR025WYGR025W 303 nt-0.43□□□□□ -2.48
VPS55P47111 YJR141WYJR141W 1044 nt-0.43□□□□□ -2.48
VPS55P47111 YCR001WYCR001W 315 nt-0.44□□□□□ -2.48
VPS55P47111 SDH7YDR511W 402 nt-0.44□□□□□ -2.48
VPS55P47111 RPS20YHL015W 366 nt-0.44□□□□□ -2.48
VPS55P47111 YJR087WYJR087W 351 nt-0.44□□□□□ -2.48
VPS55P47111 YKL202WYKL202W 582 nt-0.44□□□□□ -2.48
VPS55P47111 SEC10YLR166C 2616 nt-0.44□□□□□ -2.48
VPS55P47111 YGL230CYGL230C 444 nt-0.45□□□□□ -2.48
VPS55P47111 YGR115CYGR115C 780 nt-0.45□□□□□ -2.48
VPS55P47111 YHR131W-AYHR131W-A 246 nt-0.45□□□□□ -2.48
VPS55P47111 TAR1YLR154W-C 375 nt-0.45□□□□□ -2.48
VPS55P47111 YLR412C-AYLR412C-A 207 nt-0.45□□□□□ -2.48
VPS55P47111 SGF11YPL047W 300 nt-0.45□□□□□ -2.48
VPS55P47111 YPR092WYPR092W 306 nt-0.45□□□□□ -2.48
VPS55P47111 YLR101CYLR101C 396 nt-0.47□□□□□ -2.48
VPS55P47111 YNL319WYNL319W 441 nt-0.47□□□□□ -2.48
VPS55P47111 PCF11YDR228C 1881 nt-0.48□□□□□ -2.49
VPS55P47111 YLL006W-AYLL006W-A 177 nt-0.48□□□□□ -2.49
VPS55P47111 HTB2YBL002W 396 nt-0.48□□□□□ -2.49
VPS55P47111 YHL041WYHL041W 450 nt-0.49□□□□□ -2.49
VPS55P47111 YJL007CYJL007C 315 nt-0.49□□□□□ -2.49
VPS55P47111 YKL044WYKL044W 321 nt-0.49□□□□□ -2.49
VPS55P47111 PTP2YOR208W 2253 nt-0.5□□□□□ -2.49
VPS55P47111 TIM13YGR181W 318 nt-0.5□□□□□ -2.49
VPS55P47111 YOR011W-AYOR011W-A 207 nt-0.5□□□□□ -2.49
VPS55P47111 YCR022CYCR022C 345 nt-0.51□□□□□ -2.49
VPS55P47111 ATG31YDR022C 591 nt-0.51□□□□□ -2.49
Retrieved 100 of 7,029 protein–RNA pairs in 54.2 ms