Protein–RNA interactions for Protein: P43558

OTU1, Ubiquitin thioesterase OTU1, yeastyeast

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
OTU1P43558 YBR064WYBR064W 429 nt0.28□□□□□ -2.36
OTU1P43558 PET111YMR257C 2403 nt0.27□□□□□ -2.37
OTU1P43558 OLI1Q0130 231 nt0.27□□□□□ -2.37
OTU1P43558 RPF1YHR088W 888 nt0.27□□□□□ -2.37
OTU1P43558 YJL127W-AYJL127W-A 117 nt0.27□□□□□ -2.37
OTU1P43558 INP2YMR163C 2118 nt0.27□□□□□ -2.37
OTU1P43558 MLP1YKR095W 5628 nt0.27□□□□□ -2.37
OTU1P43558 YDL011CYDL011C 324 nt0.26□□□□□ -2.37
OTU1P43558 YJL020W-AYJL020W-A 258 nt0.26□□□□□ -2.37
OTU1P43558 YBL071CYBL071C 309 nt0.26□□□□□ -2.37
OTU1P43558 MCM10YIL150C 1716 nt0.25□□□□□ -2.37
OTU1P43558 FYV10YIL097W 1551 nt0.25□□□□□ -2.37
OTU1P43558 YAP6YDR259C 1152 nt0.25□□□□□ -2.37
OTU1P43558 SDH7YDR511W 402 nt0.25□□□□□ -2.37
OTU1P43558 PTP2YOR208W 2253 nt0.24□□□□□ -2.37
OTU1P43558 WIP1YDR374W-A 270 nt0.24□□□□□ -2.37
OTU1P43558 STF2YGR008C 255 nt0.24□□□□□ -2.37
OTU1P43558 EAF6YJR082C 342 nt0.24□□□□□ -2.37
OTU1P43558 snR78snR78 87 nt0.23□□□□□ -2.37
OTU1P43558 PAU12YGR294W 363 nt0.23□□□□□ -2.37
OTU1P43558 YKL145W-AYKL145W-A 93 nt0.23□□□□□ -2.37
OTU1P43558 ULP2YIL031W 3105 nt0.22□□□□□ -2.37
OTU1P43558 PAA1YDR071C 576 nt0.22□□□□□ -2.37
OTU1P43558 YNL058CYNL058C 951 nt0.22□□□□□ -2.37
OTU1P43558 BEM3YPL115C 3387 nt0.22□□□□□ -2.37
OTU1P43558 VIK1YPL253C 1944 nt0.22□□□□□ -2.37
OTU1P43558 MAM33YIL070C 801 nt0.21□□□□□ -2.38
OTU1P43558 YLR287CYLR287C 1068 nt0.21□□□□□ -2.38
OTU1P43558 YML108WYML108W 318 nt0.21□□□□□ -2.38
OTU1P43558 YPL229WYPL229W 621 nt0.21□□□□□ -2.38
OTU1P43558 UTP20YBL004W 7482 nt0.21□□□□□ -2.38
OTU1P43558 SPO21YOL091W 1830 nt0.2□□□□□ -2.38
OTU1P43558 RPS20YHL015W 366 nt0.19□□□□□ -2.38
OTU1P43558 YHR125WYHR125W 306 nt0.19□□□□□ -2.38
OTU1P43558 HUG1YML058W-A 207 nt0.19□□□□□ -2.38
OTU1P43558 YBR206WYBR206W 324 nt0.19□□□□□ -2.38
OTU1P43558 YHL041WYHL041W 450 nt0.18□□□□□ -2.38
OTU1P43558 ZEO1YOL109W 342 nt0.18□□□□□ -2.38
OTU1P43558 YNL054W-BYNL054W-B 5250 nt0.17□□□□□ -2.38
OTU1P43558 MLP2YIL149C 5040 nt0.17□□□□□ -2.38
OTU1P43558 tF(GAA)BtF(GAA)B 73 nt0.17□□□□□ -2.38
OTU1P43558 tF(GAA)FtF(GAA)F 73 nt0.17□□□□□ -2.38
OTU1P43558 tF(GAA)GtF(GAA)G 73 nt0.17□□□□□ -2.38
OTU1P43558 tF(GAA)H1tF(GAA)H1 73 nt0.17□□□□□ -2.38
OTU1P43558 tF(GAA)H2tF(GAA)H2 73 nt0.17□□□□□ -2.38
OTU1P43558 tF(GAA)MtF(GAA)M 73 nt0.17□□□□□ -2.38
OTU1P43558 tF(GAA)P1tF(GAA)P1 73 nt0.17□□□□□ -2.38
OTU1P43558 tF(GAA)P2tF(GAA)P2 73 nt0.17□□□□□ -2.38
OTU1P43558 YGR290WYGR290W 444 nt0.17□□□□□ -2.38
OTU1P43558 YJR011CYJR011C 786 nt0.17□□□□□ -2.38
OTU1P43558 tR(UCU)Q1tR(UCU)Q1 73 nt0.16□□□□□ -2.38
OTU1P43558 YOL013W-AYOL013W-A 192 nt0.16□□□□□ -2.38
OTU1P43558 AI1Q0050 2505 nt0.16□□□□□ -2.38
OTU1P43558 COX5BYIL111W 456 nt0.15□□□□□ -2.39
OTU1P43558 SEC8YPR055W 3198 nt0.14□□□□□ -2.39
OTU1P43558 YER084W-AYER084W-A 513 nt0.14□□□□□ -2.39
OTU1P43558 DIE2YGR227W 1578 nt0.14□□□□□ -2.39
OTU1P43558 YBL100W-BYBL100W-B 5313 nt0.13□□□□□ -2.39
OTU1P43558 NIP100YPL174C 2607 nt0.13□□□□□ -2.39
OTU1P43558 YKL083WYKL083W 615 nt0.13□□□□□ -2.39
OTU1P43558 YPR160W-AYPR160W-A 81 nt0.13□□□□□ -2.39
OTU1P43558 TRS65YGR166W 1683 nt0.13□□□□□ -2.39
OTU1P43558 ASE1YOR058C 2658 nt0.12□□□□□ -2.39
OTU1P43558 ESP1YGR098C 4893 nt0.12□□□□□ -2.39
OTU1P43558 ATG31YDR022C 591 nt0.12□□□□□ -2.39
OTU1P43558 YHR130CYHR130C 336 nt0.12□□□□□ -2.39
OTU1P43558 YFR012W-AYFR012W-A 87 nt0.11□□□□□ -2.39
OTU1P43558 AIM29YKR074W 468 nt0.11□□□□□ -2.39
OTU1P43558 YOR192C-BYOR192C-B 5313 nt0.1□□□□□ -2.39
OTU1P43558 OST4YDL232W 111 nt0.1□□□□□ -2.39
OTU1P43558 YLR399W-AYLR399W-A 105 nt0.1□□□□□ -2.39
OTU1P43558 PRP5YBR237W 2550 nt0.1□□□□□ -2.39
OTU1P43558 IQG1YPL242C 4488 nt0.09□□□□□ -2.39
OTU1P43558 HAL9YOL089C 3093 nt0.08□□□□□ -2.4
OTU1P43558 YAL067W-AYAL067W-A 228 nt0.08□□□□□ -2.4
OTU1P43558 YOR192C-CYOR192C-C 237 nt0.08□□□□□ -2.4
OTU1P43558 BIR1YJR089W 2865 nt0.08□□□□□ -2.4
OTU1P43558 PRP42YDR235W 1635 nt0.08□□□□□ -2.4
OTU1P43558 YGR174W-AYGR174W-A 87 nt0.07□□□□□ -2.4
OTU1P43558 STE18YJR086W 333 nt0.07□□□□□ -2.4
OTU1P43558 YNL211CYNL211C 261 nt0.07□□□□□ -2.4
OTU1P43558 snR54snR54 86 nt0.07□□□□□ -2.4
OTU1P43558 YHL046W-AYHL046W-A 327 nt0.06□□□□□ -2.4
OTU1P43558 YAR047CYAR047C 321 nt0.06□□□□□ -2.4
OTU1P43558 YMR321CYMR321C 318 nt0.06□□□□□ -2.4
OTU1P43558 YPR002C-AYPR002C-A 198 nt0.06□□□□□ -2.4
OTU1P43558 COX12YLR038C 252 nt0.05□□□□□ -2.4
OTU1P43558 YLR171WYLR171W 390 nt0.05□□□□□ -2.4
OTU1P43558 YML007C-AYML007C-A 111 nt0.05□□□□□ -2.4
OTU1P43558 YOL014WYOL014W 375 nt0.04□□□□□ -2.4
OTU1P43558 PCF11YDR228C 1881 nt0.03□□□□□ -2.4
OTU1P43558 BI2Q0110 1272 nt0.02□□□□□ -2.41
OTU1P43558 YOR011W-AYOR011W-A 207 nt0.02□□□□□ -2.41
OTU1P43558 HMRA2YCR096C 360 nt0.01□□□□□ -2.41
OTU1P43558 CBS1YDL069C 690 nt0.01□□□□□ -2.41
OTU1P43558 ECL1YGR146C 636 nt0.01□□□□□ -2.41
OTU1P43558 YOR053WYOR053W 342 nt0.01□□□□□ -2.41
OTU1P43558 YDR371C-AYDR371C-A 105 nt-0.01□□□□□ -2.41
OTU1P43558 ISF1YMR081C 1017 nt-0.01□□□□□ -2.41
OTU1P43558 ORC3YLL004W 1851 nt-0.01□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 126.2 ms