Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 YMR141W-AYMR141W-A 225 nt0.08□□□□□ -2.4
CDC39P25655 YPL185WYPL185W 396 nt0.08□□□□□ -2.4
CDC39P25655 YPR153WYPR153W 423 nt0.08□□□□□ -2.4
CDC39P25655 YER076W-AYER076W-A 348 nt0.07□□□□□ -2.4
CDC39P25655 YGR025WYGR025W 303 nt0.07□□□□□ -2.4
CDC39P25655 YNL050CYNL050C 813 nt0.07□□□□□ -2.4
CDC39P25655 ALY2YJL084C 3141 nt0.06□□□□□ -2.4
CDC39P25655 SEM1YDR363W-A 270 nt0.06□□□□□ -2.4
CDC39P25655 YOL160WYOL160W 342 nt0.06□□□□□ -2.4
CDC39P25655 ENV11YGR071C 2583 nt0.06□□□□□ -2.4
CDC39P25655 YOR108C-AYOR108C-A 210 nt0.05□□□□□ -2.4
CDC39P25655 CSE1YGL238W 2883 nt0.05□□□□□ -2.4
CDC39P25655 NOP9YJL010C 2001 nt0.05□□□□□ -2.4
CDC39P25655 YDR029WYDR029W 315 nt0.05□□□□□ -2.4
CDC39P25655 YLR101CYLR101C 396 nt0.05□□□□□ -2.4
CDC39P25655 RPL35AYDL191W 363 nt0.04□□□□□ -2.4
CDC39P25655 BSC3YLR465C 309 nt0.04□□□□□ -2.4
CDC39P25655 YHL041WYHL041W 450 nt0.03□□□□□ -2.4
CDC39P25655 YPL261CYPL261C 309 nt0.03□□□□□ -2.4
CDC39P25655 MRPL31YKL138C 396 nt0.02□□□□□ -2.41
CDC39P25655 YAL066WYAL066W 309 nt0.02□□□□□ -2.41
CDC39P25655 YLR399W-AYLR399W-A 105 nt0.02□□□□□ -2.41
CDC39P25655 TSC3YBR058C-A 243 nt0.02□□□□□ -2.41
CDC39P25655 YBR206WYBR206W 324 nt0.02□□□□□ -2.41
CDC39P25655 YAP6YDR259C 1152 nt0.02□□□□□ -2.41
CDC39P25655 YOL038C-AYOL038C-A 96 nt0.02□□□□□ -2.41
CDC39P25655 IPP1YBR011C 864 nt0.02□□□□□ -2.41
CDC39P25655 RAD34YDR314C 2079 nt0.01□□□□□ -2.41
CDC39P25655 snR9snR9 187 nt0.01□□□□□ -2.41
CDC39P25655 YLR198CYLR198C 360 nt0.01□□□□□ -2.41
CDC39P25655 YFR012W-AYFR012W-A 87 nt0.01□□□□□ -2.41
CDC39P25655 YPR039WYPR039W 336 nt0.01□□□□□ -2.41
CDC39P25655 snR190snR190 190 nt0.01□□□□□ -2.41
CDC39P25655 ULI1YFR026C 510 nt0□□□□□ -2.41
CDC39P25655 YJR011CYJR011C 786 nt0□□□□□ -2.41
CDC39P25655 YKL068W-AYKL068W-A 237 nt0□□□□□ -2.41
CDC39P25655 GRX5YPL059W 453 nt0□□□□□ -2.41
CDC39P25655 YPR160W-AYPR160W-A 81 nt0□□□□□ -2.41
CDC39P25655 PBI2YNL015W 228 nt-0.01□□□□□ -2.41
CDC39P25655 YNL211CYNL211C 261 nt-0.01□□□□□ -2.41
CDC39P25655 MND1YGL183C 660 nt-0.01□□□□□ -2.41
CDC39P25655 PTP2YOR208W 2253 nt-0.01□□□□□ -2.41
CDC39P25655 YCR001WYCR001W 315 nt-0.02□□□□□ -2.41
CDC39P25655 HMLALPHA2YCL067C 633 nt-0.02□□□□□ -2.41
CDC39P25655 MATALPHA2YCR039C 633 nt-0.02□□□□□ -2.41
CDC39P25655 HTB2YBL002W 396 nt-0.02□□□□□ -2.41
CDC39P25655 SEC8YPR055W 3198 nt-0.02□□□□□ -2.41
CDC39P25655 SPO21YOL091W 1830 nt-0.03□□□□□ -2.41
CDC39P25655 snR72snR72 98 nt-0.03□□□□□ -2.41
CDC39P25655 MLP1YKR095W 5628 nt-0.04□□□□□ -2.42
CDC39P25655 YJR087WYJR087W 351 nt-0.04□□□□□ -2.42
CDC39P25655 FYV10YIL097W 1551 nt-0.04□□□□□ -2.42
CDC39P25655 YPL068CYPL068C 882 nt-0.05□□□□□ -2.42
CDC39P25655 PRP42YDR235W 1635 nt-0.05□□□□□ -2.42
CDC39P25655 BER1YLR412W 825 nt-0.05□□□□□ -2.42
CDC39P25655 ATG31YDR022C 591 nt-0.07□□□□□ -2.42
CDC39P25655 YAR047CYAR047C 321 nt-0.07□□□□□ -2.42
CDC39P25655 YOR186C-AYOR186C-A 210 nt-0.07□□□□□ -2.42
CDC39P25655 YLR285C-AYLR285C-A 171 nt-0.08□□□□□ -2.42
CDC39P25655 YKL136WYKL136W 399 nt-0.08□□□□□ -2.42
CDC39P25655 YOR011W-AYOR011W-A 207 nt-0.08□□□□□ -2.42
CDC39P25655 PAA1YDR071C 576 nt-0.09□□□□□ -2.42
CDC39P25655 YHR125WYHR125W 306 nt-0.09□□□□□ -2.42
CDC39P25655 COX12YLR038C 252 nt-0.09□□□□□ -2.42
CDC39P25655 YLR171WYLR171W 390 nt-0.09□□□□□ -2.42
CDC39P25655 YLR232WYLR232W 348 nt-0.09□□□□□ -2.42
CDC39P25655 YNL146WYNL146W 303 nt-0.09□□□□□ -2.42
CDC39P25655 YDL016CYDL016C 303 nt-0.1□□□□□ -2.42
CDC39P25655 YBL071CYBL071C 309 nt-0.1□□□□□ -2.42
CDC39P25655 GLG1YKR058W 1851 nt-0.1□□□□□ -2.43
CDC39P25655 PRP5YBR237W 2550 nt-0.1□□□□□ -2.43
CDC39P25655 YLR287CYLR287C 1068 nt-0.1□□□□□ -2.43
CDC39P25655 MRPL50YNR022C 420 nt-0.1□□□□□ -2.43
CDC39P25655 YBL100W-BYBL100W-B 5313 nt-0.1□□□□□ -2.43
CDC39P25655 SSS1YDR086C 243 nt-0.11□□□□□ -2.43
CDC39P25655 YGR164WYGR164W 336 nt-0.11□□□□□ -2.43
CDC39P25655 YDR344CYDR344C 444 nt-0.11□□□□□ -2.43
CDC39P25655 YDL011CYDL011C 324 nt-0.12□□□□□ -2.43
CDC39P25655 YIL029CYIL029C 429 nt-0.12□□□□□ -2.43
CDC39P25655 YNL058CYNL058C 951 nt-0.12□□□□□ -2.43
CDC39P25655 YHL046W-AYHL046W-A 327 nt-0.13□□□□□ -2.43
CDC39P25655 YPL182CYPL182C 384 nt-0.13□□□□□ -2.43
CDC39P25655 SCEIQ0160 708 nt-0.13□□□□□ -2.43
CDC39P25655 HMRA2YCR096C 360 nt-0.14□□□□□ -2.43
CDC39P25655 YDL185C-AYDL185C-A 228 nt-0.14□□□□□ -2.43
CDC39P25655 COX5BYIL111W 456 nt-0.14□□□□□ -2.43
CDC39P25655 YIR044CYIR044C 186 nt-0.14□□□□□ -2.43
CDC39P25655 YLR334CYLR334C 381 nt-0.14□□□□□ -2.43
CDC39P25655 snR54snR54 86 nt-0.14□□□□□ -2.43
CDC39P25655 NNF2YGR089W 2811 nt-0.14□□□□□ -2.43
CDC39P25655 DIE2YGR227W 1578 nt-0.14□□□□□ -2.43
CDC39P25655 YKU70YMR284W 1809 nt-0.14□□□□□ -2.43
CDC39P25655 RCO1YMR075W 2055 nt-0.14□□□□□ -2.43
CDC39P25655 SDH7YDR511W 402 nt-0.14□□□□□ -2.43
CDC39P25655 YER135CYER135C 393 nt-0.14□□□□□ -2.43
CDC39P25655 YJL127W-AYJL127W-A 117 nt-0.14□□□□□ -2.43
CDC39P25655 ECL1YGR146C 636 nt-0.16□□□□□ -2.43
CDC39P25655 YPR002C-AYPR002C-A 198 nt-0.16□□□□□ -2.43
CDC39P25655 YCR018C-AYCR018C-A 255 nt-0.17□□□□□ -2.44
CDC39P25655 FYV7YLR068W 456 nt-0.17□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 29.1 ms