Protein–RNA interactions for Protein: P20433

RPB4, DNA-directed RNA polymerase II subunit RPB4, yeastyeast

Predicted RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB4P20433 PET111YMR257C 2403 nt0.22□□□□□ -2.37
RPB4P20433 HMLALPHA2YCL067C 633 nt0.21□□□□□ -2.38
RPB4P20433 MATALPHA2YCR039C 633 nt0.21□□□□□ -2.38
RPB4P20433 YDL016CYDL016C 303 nt0.21□□□□□ -2.38
RPB4P20433 QCR9YGR183C 201 nt0.21□□□□□ -2.38
RPB4P20433 YPL185WYPL185W 396 nt0.21□□□□□ -2.38
RPB4P20433 PAU12YGR294W 363 nt0.2□□□□□ -2.38
RPB4P20433 BIG1YHR101C 1008 nt0.2□□□□□ -2.38
RPB4P20433 YIR044CYIR044C 186 nt0.2□□□□□ -2.38
RPB4P20433 YOR032W-AYOR032W-A 201 nt0.2□□□□□ -2.38
RPB4P20433 YBR064WYBR064W 429 nt0.19□□□□□ -2.38
RPB4P20433 YBL100W-BYBL100W-B 5313 nt0.19□□□□□ -2.38
RPB4P20433 CUL3YGR003W 2235 nt0.18□□□□□ -2.38
RPB4P20433 ESP1YGR098C 4893 nt0.18□□□□□ -2.38
RPB4P20433 snR72snR72 98 nt0.17□□□□□ -2.38
RPB4P20433 YGR290WYGR290W 444 nt0.17□□□□□ -2.38
RPB4P20433 INP2YMR163C 2118 nt0.17□□□□□ -2.38
RPB4P20433 VIK1YPL253C 1944 nt0.17□□□□□ -2.38
RPB4P20433 TIM13YGR181W 318 nt0.16□□□□□ -2.38
RPB4P20433 YIR018C-AYIR018C-A 138 nt0.16□□□□□ -2.38
RPB4P20433 YOL013W-AYOL013W-A 192 nt0.16□□□□□ -2.38
RPB4P20433 MCM10YIL150C 1716 nt0.16□□□□□ -2.38
RPB4P20433 OLI1Q0130 231 nt0.15□□□□□ -2.39
RPB4P20433 YBL008W-AYBL008W-A 240 nt0.15□□□□□ -2.39
RPB4P20433 PBI2YNL015W 228 nt0.15□□□□□ -2.39
RPB4P20433 SNU56YDR240C 1479 nt0.15□□□□□ -2.39
RPB4P20433 YNL054W-BYNL054W-B 5250 nt0.13□□□□□ -2.39
RPB4P20433 BIR1YJR089W 2865 nt0.12□□□□□ -2.39
RPB4P20433 YAP6YDR259C 1152 nt0.12□□□□□ -2.39
RPB4P20433 EMC4YGL231C 573 nt0.12□□□□□ -2.39
RPB4P20433 snR51snR51 107 nt0.12□□□□□ -2.39
RPB4P20433 SEC8YPR055W 3198 nt0.1□□□□□ -2.39
RPB4P20433 YCR001WYCR001W 315 nt0.09□□□□□ -2.4
RPB4P20433 NFU1YKL040C 771 nt0.09□□□□□ -2.4
RPB4P20433 ASE1YOR058C 2658 nt0.09□□□□□ -2.4
RPB4P20433 PAA1YDR071C 576 nt0.08□□□□□ -2.4
RPB4P20433 PTP2YOR208W 2253 nt0.08□□□□□ -2.4
RPB4P20433 YBR206WYBR206W 324 nt0.07□□□□□ -2.4
RPB4P20433 STE5YDR103W 2754 nt0.06□□□□□ -2.4
RPB4P20433 SDH7YDR511W 402 nt0.06□□□□□ -2.4
RPB4P20433 RPS20YHL015W 366 nt0.06□□□□□ -2.4
RPB4P20433 YPR160W-AYPR160W-A 81 nt0.06□□□□□ -2.4
RPB4P20433 SPO21YOL091W 1830 nt0.06□□□□□ -2.4
RPB4P20433 YDL011CYDL011C 324 nt0.05□□□□□ -2.4
RPB4P20433 COX5BYIL111W 456 nt0.05□□□□□ -2.4
RPB4P20433 HAL9YOL089C 3093 nt0.05□□□□□ -2.4
RPB4P20433 MAM33YIL070C 801 nt0.04□□□□□ -2.4
RPB4P20433 PRP5YBR237W 2550 nt0.03□□□□□ -2.4
RPB4P20433 OST4YDL232W 111 nt0.03□□□□□ -2.4
RPB4P20433 YER078W-AYER078W-A 165 nt0.03□□□□□ -2.4
RPB4P20433 YJL020W-AYJL020W-A 258 nt0.03□□□□□ -2.4
RPB4P20433 YJR011CYJR011C 786 nt0.03□□□□□ -2.4
RPB4P20433 YML108WYML108W 318 nt0.03□□□□□ -2.4
RPB4P20433 YFR012W-AYFR012W-A 87 nt0.02□□□□□ -2.41
RPB4P20433 COX12YLR038C 252 nt0.02□□□□□ -2.41
RPB4P20433 YOR192C-BYOR192C-B 5313 nt0.02□□□□□ -2.41
RPB4P20433 YAL067W-AYAL067W-A 228 nt0.01□□□□□ -2.41
RPB4P20433 YLR269CYLR269C 351 nt0.01□□□□□ -2.41
RPB4P20433 PRP42YDR235W 1635 nt0□□□□□ -2.41
RPB4P20433 YBL071CYBL071C 309 nt0□□□□□ -2.41
RPB4P20433 NIP100YPL174C 2607 nt-0□□□□□ -2.41
RPB4P20433 YLR399W-AYLR399W-A 105 nt-0.01□□□□□ -2.41
RPB4P20433 YNL058CYNL058C 951 nt-0.01□□□□□ -2.41
RPB4P20433 YMR321CYMR321C 318 nt-0.02□□□□□ -2.41
RPB4P20433 GPI15YNL038W 690 nt-0.02□□□□□ -2.41
RPB4P20433 YPL229WYPL229W 621 nt-0.03□□□□□ -2.41
RPB4P20433 RPF1YHR088W 888 nt-0.04□□□□□ -2.42
RPB4P20433 ATG31YDR022C 591 nt-0.05□□□□□ -2.42
RPB4P20433 RCO1YMR075W 2055 nt-0.06□□□□□ -2.42
RPB4P20433 YHL041WYHL041W 450 nt-0.06□□□□□ -2.42
RPB4P20433 YHL046W-AYHL046W-A 327 nt-0.06□□□□□ -2.42
RPB4P20433 YFL012WYFL012W 447 nt-0.07□□□□□ -2.42
RPB4P20433 YNL211CYNL211C 261 nt-0.07□□□□□ -2.42
RPB4P20433 YOR053WYOR053W 342 nt-0.07□□□□□ -2.42
RPB4P20433 ORC3YLL004W 1851 nt-0.07□□□□□ -2.42
RPB4P20433 YDR371C-AYDR371C-A 105 nt-0.08□□□□□ -2.42
RPB4P20433 YLR287CYLR287C 1068 nt-0.08□□□□□ -2.42
RPB4P20433 THO2YNL139C 4794 nt-0.09□□□□□ -2.42
RPB4P20433 YLR171WYLR171W 390 nt-0.09□□□□□ -2.42
RPB4P20433 RPS26AYGL189C 360 nt-0.1□□□□□ -2.43
RPB4P20433 ISF1YMR081C 1017 nt-0.1□□□□□ -2.43
RPB4P20433 ZEO1YOL109W 342 nt-0.1□□□□□ -2.43
RPB4P20433 YLR232WYLR232W 348 nt-0.11□□□□□ -2.43
RPB4P20433 COG8YML071C 1824 nt-0.11□□□□□ -2.43
RPB4P20433 YOR345CYOR345C 351 nt-0.12□□□□□ -2.43
RPB4P20433 snR45snR45 172 nt-0.12□□□□□ -2.43
RPB4P20433 RPL35AYDL191W 363 nt-0.13□□□□□ -2.43
RPB4P20433 YHR125WYHR125W 306 nt-0.14□□□□□ -2.43
RPB4P20433 YKL123WYKL123W 381 nt-0.14□□□□□ -2.43
RPB4P20433 YOR186C-AYOR186C-A 210 nt-0.14□□□□□ -2.43
RPB4P20433 snR190snR190 190 nt-0.14□□□□□ -2.43
RPB4P20433 EAF6YJR082C 342 nt-0.15□□□□□ -2.43
RPB4P20433 YKL083WYKL083W 615 nt-0.15□□□□□ -2.43
RPB4P20433 LEE1YPL054W 906 nt-0.15□□□□□ -2.43
RPB4P20433 YPR002C-AYPR002C-A 198 nt-0.15□□□□□ -2.43
RPB4P20433 NNF2YGR089W 2811 nt-0.15□□□□□ -2.43
RPB4P20433 YER084W-AYER084W-A 513 nt-0.16□□□□□ -2.44
RPB4P20433 ULI1YFR026C 510 nt-0.16□□□□□ -2.44
RPB4P20433 YNL146WYNL146W 303 nt-0.16□□□□□ -2.44
RPB4P20433 MRPL50YNR022C 420 nt-0.16□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 68.5 ms