Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeast

Known RBP Predictions only

Length 128 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL40B	P0CH09	AFB1	YLR040C	675 nt		-0.05	□□□□□ -2.42
RPL40B	P0CH09	RPS27A	YKL156W	249 nt		-0.06	□□□□□ -2.42
RPL40B	P0CH09	IRC16	YPR038W	360 nt		-0.06	□□□□□ -2.42
RPL40B	P0CH09	OLI1	Q0130	231 nt		-0.07	□□□□□ -2.42
RPL40B	P0CH09	YGL239C	YGL239C	315 nt		-0.07	□□□□□ -2.42
RPL40B	P0CH09	SCEI	Q0160	708 nt		-0.07	□□□□□ -2.42
RPL40B	P0CH09	PRP5	YBR237W	2550 nt		-0.07	□□□□□ -2.42
RPL40B	P0CH09	YDR029W	YDR029W	315 nt		-0.08	□□□□□ -2.42
RPL40B	P0CH09	MND1	YGL183C	660 nt		-0.08	□□□□□ -2.42
RPL40B	P0CH09	YOR053W	YOR053W	342 nt		-0.08	□□□□□ -2.42
RPL40B	P0CH09	MCM10	YIL150C	1716 nt		-0.08	□□□□□ -2.42
RPL40B	P0CH09	MYO1	YHR023W	5787 nt		-0.08	□□□□□ -2.42
RPL40B	P0CH09	COX5B	YIL111W	456 nt		-0.09	□□□□□ -2.42
RPL40B	P0CH09	APQ13	YJL075C	417 nt		-0.09	□□□□□ -2.42
RPL40B	P0CH09	YOL160W	YOL160W	342 nt		-0.09	□□□□□ -2.42
RPL40B	P0CH09	YBR064W	YBR064W	429 nt		-0.09	□□□□□ -2.42
RPL40B	P0CH09	MRPL32	YCR003W	552 nt		-0.1	□□□□□ -2.43
RPL40B	P0CH09	PRP21	YJL203W	843 nt		-0.1	□□□□□ -2.43
RPL40B	P0CH09	ECM9	YKR004C	1134 nt		-0.1	□□□□□ -2.43
RPL40B	P0CH09	MRPS8	YMR158W	468 nt		-0.1	□□□□□ -2.43
RPL40B	P0CH09	MRPL50	YNR022C	420 nt		-0.1	□□□□□ -2.43
RPL40B	P0CH09	YPL060C-A	YPL060C-A	3315 nt		-0.1	□□□□□ -2.43
RPL40B	P0CH09	YIR018C-A	YIR018C-A	138 nt		-0.11	□□□□□ -2.43
RPL40B	P0CH09	YMR141W-A	YMR141W-A	225 nt		-0.11	□□□□□ -2.43
RPL40B	P0CH09	YPL185W	YPL185W	396 nt		-0.11	□□□□□ -2.43
RPL40B	P0CH09	YDL187C	YDL187C	330 nt		-0.12	□□□□□ -2.43
RPL40B	P0CH09	PAA1	YDR071C	576 nt		-0.12	□□□□□ -2.43
RPL40B	P0CH09	SSS1	YDR086C	243 nt		-0.12	□□□□□ -2.43
RPL40B	P0CH09	YLR198C	YLR198C	360 nt		-0.12	□□□□□ -2.43
RPL40B	P0CH09	PBI2	YNL015W	228 nt		-0.12	□□□□□ -2.43
RPL40B	P0CH09	snR190	snR190	190 nt		-0.12	□□□□□ -2.43
RPL40B	P0CH09	YAP6	YDR259C	1152 nt		-0.13	□□□□□ -2.43
RPL40B	P0CH09	YIR044C	YIR044C	186 nt		-0.13	□□□□□ -2.43
RPL40B	P0CH09	YBL008W-A	YBL008W-A	240 nt		-0.13	□□□□□ -2.43
RPL40B	P0CH09	ORC3	YLL004W	1851 nt		-0.14	□□□□□ -2.43
RPL40B	P0CH09	SPO21	YOL091W	1830 nt		-0.14	□□□□□ -2.43
RPL40B	P0CH09	snR72	snR72	98 nt		-0.14	□□□□□ -2.43
RPL40B	P0CH09	YKL202W	YKL202W	582 nt		-0.14	□□□□□ -2.43
RPL40B	P0CH09	YPL261C	YPL261C	309 nt		-0.14	□□□□□ -2.43
RPL40B	P0CH09	RPL35A	YDL191W	363 nt		-0.15	□□□□□ -2.43
RPL40B	P0CH09	OST4	YDL232W	111 nt		-0.15	□□□□□ -2.43
RPL40B	P0CH09	YOR186C-A	YOR186C-A	210 nt		-0.15	□□□□□ -2.43
RPL40B	P0CH09	RCO1	YMR075W	2055 nt		-0.16	□□□□□ -2.44
RPL40B	P0CH09	YDR371C-A	YDR371C-A	105 nt		-0.16	□□□□□ -2.44
RPL40B	P0CH09	YER175W-A	YER175W-A	165 nt		-0.16	□□□□□ -2.44
RPL40B	P0CH09	YIL066W-A	YIL066W-A	444 nt		-0.16	□□□□□ -2.44
RPL40B	P0CH09	SNU56	YDR240C	1479 nt		-0.16	□□□□□ -2.44
RPL40B	P0CH09	YJR087W	YJR087W	351 nt		-0.17	□□□□□ -2.44
RPL40B	P0CH09	YKL068W-A	YKL068W-A	237 nt		-0.17	□□□□□ -2.44
RPL40B	P0CH09	YOL029C	YOL029C	606 nt		-0.17	□□□□□ -2.44
RPL40B	P0CH09	LEE1	YPL054W	906 nt		-0.17	□□□□□ -2.44
RPL40B	P0CH09	YPL182C	YPL182C	384 nt		-0.17	□□□□□ -2.44
RPL40B	P0CH09	YPR160W-A	YPR160W-A	81 nt		-0.17	□□□□□ -2.44
RPL40B	P0CH09	YCR100C	YCR100C	951 nt		-0.18	□□□□□ -2.44
RPL40B	P0CH09	YER135C	YER135C	393 nt		-0.18	□□□□□ -2.44
RPL40B	P0CH09	YFR012W-A	YFR012W-A	87 nt		-0.18	□□□□□ -2.44
RPL40B	P0CH09	HUR1	YGL168W	333 nt		-0.18	□□□□□ -2.44
RPL40B	P0CH09	YIL029C	YIL029C	429 nt		-0.18	□□□□□ -2.44
RPL40B	P0CH09	YGR025W	YGR025W	303 nt		-0.19	□□□□□ -2.44
RPL40B	P0CH09	NFU1	YKL040C	771 nt		-0.19	□□□□□ -2.44
RPL40B	P0CH09	YLR399W-A	YLR399W-A	105 nt		-0.19	□□□□□ -2.44
RPL40B	P0CH09	PTP2	YOR208W	2253 nt		-0.2	□□□□□ -2.44
RPL40B	P0CH09	RPS26A	YGL189C	360 nt		-0.2	□□□□□ -2.44
RPL40B	P0CH09	MAM33	YIL070C	801 nt		-0.2	□□□□□ -2.44
RPL40B	P0CH09	YAL067W-A	YAL067W-A	228 nt		-0.2	□□□□□ -2.44
RPL40B	P0CH09	YBR206W	YBR206W	324 nt		-0.2	□□□□□ -2.44
RPL40B	P0CH09	snR51	snR51	107 nt		-0.2	□□□□□ -2.44
RPL40B	P0CH09	ASE1	YOR058C	2658 nt		-0.21	□□□□□ -2.44
RPL40B	P0CH09	TIM13	YGR181W	318 nt		-0.21	□□□□□ -2.44
RPL40B	P0CH09	YKL136W	YKL136W	399 nt		-0.21	□□□□□ -2.44
RPL40B	P0CH09	YML108W	YML108W	318 nt		-0.21	□□□□□ -2.44
RPL40B	P0CH09	YOL038C-A	YOL038C-A	96 nt		-0.21	□□□□□ -2.44
RPL40B	P0CH09	DCP1	YOL149W	696 nt		-0.21	□□□□□ -2.44
RPL40B	P0CH09	TSC3	YBR058C-A	243 nt		-0.21	□□□□□ -2.44
RPL40B	P0CH09	YCR001W	YCR001W	315 nt		-0.23	□□□□□ -2.45
RPL40B	P0CH09	YKL044W	YKL044W	321 nt		-0.23	□□□□□ -2.45
RPL40B	P0CH09	YAL066W	YAL066W	309 nt		-0.24	□□□□□ -2.45
RPL40B	P0CH09	YDL016C	YDL016C	303 nt		-0.25	□□□□□ -2.45
RPL40B	P0CH09	YDR210W	YDR210W	228 nt		-0.25	□□□□□ -2.45
RPL40B	P0CH09	SDH7	YDR511W	402 nt		-0.25	□□□□□ -2.45
RPL40B	P0CH09	YJR011C	YJR011C	786 nt		-0.25	□□□□□ -2.45
RPL40B	P0CH09	YNL146W	YNL146W	303 nt		-0.25	□□□□□ -2.45
RPL40B	P0CH09	YNL211C	YNL211C	261 nt		-0.25	□□□□□ -2.45
RPL40B	P0CH09	YLR171W	YLR171W	390 nt		-0.26	□□□□□ -2.45
RPL40B	P0CH09	YPR170W-A	YPR170W-A	186 nt		-0.26	□□□□□ -2.45
RPL40B	P0CH09	MPC1	YGL080W	393 nt		-0.27	□□□□□ -2.45
RPL40B	P0CH09	YHL046W-A	YHL046W-A	327 nt		-0.27	□□□□□ -2.45
RPL40B	P0CH09	YKL023C-A	YKL023C-A	228 nt		-0.27	□□□□□ -2.45
RPL40B	P0CH09	IPP1	YBR011C	864 nt		-0.27	□□□□□ -2.45
RPL40B	P0CH09	HMLALPHA2	YCL067C	633 nt		-0.28	□□□□□ -2.45
RPL40B	P0CH09	MATALPHA2	YCR039C	633 nt		-0.28	□□□□□ -2.45
RPL40B	P0CH09	YPL225W	YPL225W	441 nt		-0.28	□□□□□ -2.45
RPL40B	P0CH09	BER1	YLR412W	825 nt		-0.29	□□□□□ -2.46
RPL40B	P0CH09	YOR345C	YOR345C	351 nt		-0.29	□□□□□ -2.46
RPL40B	P0CH09	ATG31	YDR022C	591 nt		-0.3	□□□□□ -2.46
RPL40B	P0CH09	RPS20	YHL015W	366 nt		-0.3	□□□□□ -2.46
RPL40B	P0CH09	YNL058C	YNL058C	951 nt		-0.3	□□□□□ -2.46
RPL40B	P0CH09	NIP1	YMR309C	2439 nt		-0.3	□□□□□ -2.46
RPL40B	P0CH09	YKU70	YMR284W	1809 nt		-0.31	□□□□□ -2.46
RPL40B	P0CH09	snR8	snR8	190 nt		-0.31	□□□□□ -2.46

Retrieved 100 of 7,029 protein–RNA pairs in 38.7 ms