Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YDR344CYDR344C 444 nt-1.59□□□□□ -2.66
RKR1Q04781 SWM2YNR004W 441 nt-1.6□□□□□ -2.67
RKR1Q04781 RRT1YBL048W 312 nt-1.61□□□□□ -2.67
RKR1Q04781 PEX15YOL044W 1152 nt-1.61□□□□□ -2.67
RKR1Q04781 SPO21YOL091W 1830 nt-1.61□□□□□ -2.67
RKR1Q04781 POL32YJR043C 1053 nt-1.62□□□□□ -2.67
RKR1Q04781 IPP1YBR011C 864 nt-1.63□□□□□ -2.67
RKR1Q04781 GRX5YPL059W 453 nt-1.63□□□□□ -2.67
RKR1Q04781 CRG1YHR209W 876 nt-1.64□□□□□ -2.67
RKR1Q04781 YNL067W-BYNL067W-B 141 nt-1.64□□□□□ -2.67
RKR1Q04781 RPS25BYLR333C 327 nt-1.65□□□□□ -2.67
RKR1Q04781 GIM5YML094W 492 nt-1.65□□□□□ -2.67
RKR1Q04781 RTC6YPL183W-A 282 nt-1.67□□□□□ -2.68
RKR1Q04781 AFB1YLR040C 675 nt-1.68□□□□□ -2.68
RKR1Q04781 YOR345CYOR345C 351 nt-1.68□□□□□ -2.68
RKR1Q04781 YGL204CYGL204C 306 nt-1.69□□□□□ -2.68
RKR1Q04781 PRP21YJL203W 843 nt-1.7□□□□□ -2.68
RKR1Q04781 ZIP1YDR285W 2628 nt-1.71□□□□□ -2.68
RKR1Q04781 YKL023C-AYKL023C-A 228 nt-1.71□□□□□ -2.68
RKR1Q04781 YOL118CYOL118C 309 nt-1.71□□□□□ -2.68
RKR1Q04781 YGR115CYGR115C 780 nt-1.72□□□□□ -2.69
RKR1Q04781 SKI7YOR076C 2244 nt-1.73□□□□□ -2.69
RKR1Q04781 RPL42BYHR141C 321 nt-1.73□□□□□ -2.69
RKR1Q04781 YPL044CYPL044C 549 nt-1.74□□□□□ -2.69
RKR1Q04781 MRPL24YMR193W 777 nt-1.75□□□□□ -2.69
RKR1Q04781 YPR160W-AYPR160W-A 81 nt-1.76□□□□□ -2.69
RKR1Q04781 YDR182W-AYDR182W-A 204 nt-1.79□□□□□ -2.7
RKR1Q04781 MRPL25YGR076C 474 nt-1.79□□□□□ -2.7
RKR1Q04781 YML007C-AYML007C-A 111 nt-1.8□□□□□ -2.7
RKR1Q04781 AEP1YMR064W 1557 nt-1.8□□□□□ -2.7
RKR1Q04781 YDL009CYDL009C 324 nt-1.81□□□□□ -2.7
RKR1Q04781 GPG1YGL121C 381 nt-1.81□□□□□ -2.7
RKR1Q04781 VAB2YEL005C 849 nt-1.81□□□□□ -2.7
RKR1Q04781 IST3YIR005W 447 nt-1.81□□□□□ -2.7
RKR1Q04781 APQ13YJL075C 417 nt-1.81□□□□□ -2.7
RKR1Q04781 GIC2YDR309C 1152 nt-1.82□□□□□ -2.7
RKR1Q04781 YFR057WYFR057W 456 nt-1.82□□□□□ -2.7
RKR1Q04781 YHR028W-AYHR028W-A 321 nt-1.82□□□□□ -2.7
RKR1Q04781 YJL077W-AYJL077W-A 87 nt-1.82□□□□□ -2.7
RKR1Q04781 YMR141W-AYMR141W-A 225 nt-1.82□□□□□ -2.7
RKR1Q04781 YBR184WYBR184W 1572 nt-1.82□□□□□ -2.7
RKR1Q04781 PCL2YDL127W 927 nt-1.84□□□□□ -2.7
RKR1Q04781 YPL185WYPL185W 396 nt-1.85□□□□□ -2.7
RKR1Q04781 YBR121C-AYBR121C-A 159 nt-1.85□□□□□ -2.7
RKR1Q04781 RPF1YHR088W 888 nt-1.86□□□□□ -2.71
RKR1Q04781 ATC1YDR184C 885 nt-1.88□□□□□ -2.71
RKR1Q04781 YIL071W-AYIL071W-A 477 nt-1.88□□□□□ -2.71
RKR1Q04781 YOL166W-AYOL166W-A 156 nt-1.88□□□□□ -2.71
RKR1Q04781 YJR079WYJR079W 330 nt-1.89□□□□□ -2.71
RKR1Q04781 tA(UGC)QtA(UGC)Q 76 nt-1.9□□□□□ -2.71
RKR1Q04781 QCR7YDR529C 384 nt-1.9□□□□□ -2.71
RKR1Q04781 YOR248WYOR248W 303 nt-1.9□□□□□ -2.71
RKR1Q04781 AI4Q0065 1671 nt-1.9□□□□□ -2.71
RKR1Q04781 YLR399W-AYLR399W-A 105 nt-1.91□□□□□ -2.72
RKR1Q04781 PHO80YOL001W 882 nt-1.91□□□□□ -2.72
RKR1Q04781 BI3Q0115 1554 nt-1.91□□□□□ -2.72
RKR1Q04781 YDL007C-AYDL007C-A 258 nt-1.92□□□□□ -2.72
RKR1Q04781 IRC2YDR112W 309 nt-1.92□□□□□ -2.72
RKR1Q04781 YLR287CYLR287C 1068 nt-1.92□□□□□ -2.72
RKR1Q04781 YMR075C-AYMR075C-A 366 nt-1.92□□□□□ -2.72
RKR1Q04781 YGL123C-AYGL123C-A 231 nt-1.93□□□□□ -2.72
RKR1Q04781 snR44snR44 211 nt-1.93□□□□□ -2.72
RKR1Q04781 YDR194W-AYDR194W-A 153 nt-1.93□□□□□ -2.72
RKR1Q04781 SEM1YDR363W-A 270 nt-1.94□□□□□ -2.72
RKR1Q04781 YIL066W-AYIL066W-A 444 nt-1.94□□□□□ -2.72
RKR1Q04781 YBL039C-AYBL039C-A 84 nt-1.94□□□□□ -2.72
RKR1Q04781 PCF11YDR228C 1881 nt-1.94□□□□□ -2.72
RKR1Q04781 ATX1YNL259C 222 nt-1.96□□□□□ -2.72
RKR1Q04781 RTR2YDR066C 591 nt-1.97□□□□□ -2.72
RKR1Q04781 YNL319WYNL319W 441 nt-1.98□□□□□ -2.73
RKR1Q04781 tY(GUA)QtY(GUA)Q 84 nt-1.98□□□□□ -2.73
RKR1Q04781 BI4Q0120 1917 nt-1.98□□□□□ -2.73
RKR1Q04781 RFA3YJL173C 369 nt-1.99□□□□□ -2.73
RKR1Q04781 BLS1YLR408C 369 nt-1.99□□□□□ -2.73
RKR1Q04781 YBR126W-BYBR126W-B 144 nt-2□□□□□ -2.73
RKR1Q04781 tP(UGG)QtP(UGG)Q 72 nt-2.02□□□□□ -2.73
RKR1Q04781 PFS1YHR185C 714 nt-2.02□□□□□ -2.73
RKR1Q04781 YHR131W-AYHR131W-A 246 nt-2.03□□□□□ -2.73
RKR1Q04781 CMC1YKL137W 336 nt-2.03□□□□□ -2.73
RKR1Q04781 YIM2YMR151W 438 nt-2.03□□□□□ -2.73
RKR1Q04781 YBR064WYBR064W 429 nt-2.03□□□□□ -2.73
RKR1Q04781 ATP15YPL271W 189 nt-2.03□□□□□ -2.73
RKR1Q04781 BET4YJL031C 984 nt-2.05□□□□□ -2.74
RKR1Q04781 YDL068WYDL068W 330 nt-2.06□□□□□ -2.74
RKR1Q04781 YIL032CYIL032C 357 nt-2.06□□□□□ -2.74
RKR1Q04781 TDA2YER071C 381 nt-2.06□□□□□ -2.74
RKR1Q04781 ECL1YGR146C 636 nt-2.07□□□□□ -2.74
RKR1Q04781 YHR138CYHR138C 345 nt-2.07□□□□□ -2.74
RKR1Q04781 YKE2YLR200W 345 nt-2.07□□□□□ -2.74
RKR1Q04781 SUS1YBR111W-A 291 nt-2.07□□□□□ -2.74
RKR1Q04781 YER046W-AYER046W-A 330 nt-2.08□□□□□ -2.74
RKR1Q04781 YDR543CYDR543C 300 nt-2.1□□□□□ -2.75
RKR1Q04781 YER079WYER079W 633 nt-2.1□□□□□ -2.75
RKR1Q04781 YFR012W-AYFR012W-A 87 nt-2.1□□□□□ -2.75
RKR1Q04781 YLL006W-AYLL006W-A 177 nt-2.1□□□□□ -2.75
RKR1Q04781 YAL068W-AYAL068W-A 255 nt-2.1□□□□□ -2.75
RKR1Q04781 ARV1YLR242C 966 nt-2.1□□□□□ -2.75
RKR1Q04781 COX8YLR395C 237 nt-2.1□□□□□ -2.75
RKR1Q04781 YOR161W-AYOR161W-A 81 nt-2.1□□□□□ -2.75
RKR1Q04781 MFA2YNL145W 117 nt-2.11□□□□□ -2.75
Retrieved 100 of 7,029 protein–RNA pairs in 26.6 ms