Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 AC092667.1-201ENST00000434301 2586 ntBASIC17.65■□□□□ 0.42
CDH20Q9HBT6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
CDH20Q9HBT6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDH20Q9HBT6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 AL355802.2-201ENST00000402069 882 ntBASIC17.64■□□□□ 0.41
CDH20Q9HBT6 GUSBP6-202ENST00000438529 1198 ntBASIC17.64■□□□□ 0.41
CDH20Q9HBT6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 MIR4758-201ENST00000577688 71 ntBASIC17.64■□□□□ 0.41
CDH20Q9HBT6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 AC073130.3-201ENST00000624389 2278 ntBASIC17.64■□□□□ 0.41
CDH20Q9HBT6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CDH20Q9HBT6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 KRT17P1-201ENST00000399211 1546 ntBASIC17.63■□□□□ 0.41
CDH20Q9HBT6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 KRT8P36-201ENST00000489121 1440 ntBASIC17.63■□□□□ 0.41
CDH20Q9HBT6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CDH20Q9HBT6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 RNF165-205ENST00000588679 2904 ntBASIC17.62■□□□□ 0.41
CDH20Q9HBT6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH20Q9HBT6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH20Q9HBT6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH20Q9HBT6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH20Q9HBT6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH20Q9HBT6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH20Q9HBT6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CDH20Q9HBT6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH20Q9HBT6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH20Q9HBT6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH20Q9HBT6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH20Q9HBT6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CDH20Q9HBT6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
CDH20Q9HBT6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CDH20Q9HBT6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH20Q9HBT6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
CDH20Q9HBT6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms