Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL1A2P08123 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
COL1A2P08123 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.3■■□□□ 1.16
COL1A2P08123 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL1A2P08123 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL1A2P08123 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL1A2P08123 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.29■■□□□ 1.16
COL1A2P08123 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.29■■□□□ 1.16
COL1A2P08123 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL1A2P08123 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL1A2P08123 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL1A2P08123 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
COL1A2P08123 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.29■■□□□ 1.16
COL1A2P08123 AC110285.5-201ENST00000611501 352 ntBASIC22.29■■□□□ 1.16
COL1A2P08123 AF106564.1-201ENST00000607058 2553 ntBASIC22.29■■□□□ 1.16
COL1A2P08123 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL1A2P08123 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL1A2P08123 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
COL1A2P08123 AC006128.1-201ENST00000624704 1661 ntBASIC22.29■■□□□ 1.16
COL1A2P08123 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
COL1A2P08123 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL1A2P08123 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.29■■□□□ 1.16
COL1A2P08123 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.29■■□□□ 1.16
COL1A2P08123 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL1A2P08123 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL1A2P08123 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL1A2P08123 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL1A2P08123 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL1A2P08123 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL1A2P08123 KRASP1-201ENST00000407852 552 ntBASIC22.28■■□□□ 1.16
COL1A2P08123 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL1A2P08123 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.28■■□□□ 1.16
COL1A2P08123 PRKY-204ENST00000533551 1019 ntBASIC22.28■■□□□ 1.16
COL1A2P08123 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
COL1A2P08123 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL1A2P08123 AL121603.2-201ENST00000557373 2117 ntBASIC22.28■■□□□ 1.16
COL1A2P08123 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.28■■□□□ 1.16
COL1A2P08123 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
COL1A2P08123 HLA-G-202ENST00000376815 851 ntBASIC22.27■■□□□ 1.16
COL1A2P08123 HLA-G-203ENST00000376818 1127 ntBASIC22.27■■□□□ 1.16
COL1A2P08123 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
COL1A2P08123 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL1A2P08123 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.27■■□□□ 1.16
COL1A2P08123 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.27■■□□□ 1.16
COL1A2P08123 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
COL1A2P08123 AL031963.3-201ENST00000606441 850 ntBASIC22.27■■□□□ 1.16
COL1A2P08123 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
COL1A2P08123 AC026310.3-201ENST00000625186 2373 ntBASIC22.27■■□□□ 1.16
COL1A2P08123 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL1A2P08123 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
COL1A2P08123 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL1A2P08123 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
COL1A2P08123 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL1A2P08123 AC012618.2-201ENST00000428058 849 ntBASIC22.26■■□□□ 1.15
COL1A2P08123 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.26■■□□□ 1.15
COL1A2P08123 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.26■■□□□ 1.15
COL1A2P08123 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
COL1A2P08123 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL1A2P08123 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
COL1A2P08123 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL1A2P08123 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL1A2P08123 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL1A2P08123 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
COL1A2P08123 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL1A2P08123 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL1A2P08123 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL1A2P08123 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.26■■□□□ 1.15
COL1A2P08123 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A2P08123 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A2P08123 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A2P08123 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.25■■□□□ 1.15
COL1A2P08123 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.25■■□□□ 1.15
COL1A2P08123 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.25■■□□□ 1.15
COL1A2P08123 AL121906.2-201ENST00000621597 723 ntBASIC22.25■■□□□ 1.15
COL1A2P08123 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A2P08123 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A2P08123 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.25■■□□□ 1.15
COL1A2P08123 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.25■■□□□ 1.15
COL1A2P08123 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A2P08123 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A2P08123 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A2P08123 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A2P08123 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A2P08123 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
COL1A2P08123 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL1A2P08123 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.25■■□□□ 1.15
COL1A2P08123 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
COL1A2P08123 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.25■■□□□ 1.15
COL1A2P08123 Z99916.2-201ENST00000604037 246 ntBASIC22.25■■□□□ 1.15
COL1A2P08123 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A2P08123 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A2P08123 KRT8P20-201ENST00000423953 1409 ntBASIC22.24■■□□□ 1.15
COL1A2P08123 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.24■■□□□ 1.15
COL1A2P08123 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A2P08123 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A2P08123 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.24■■□□□ 1.15
COL1A2P08123 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A2P08123 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL1A2P08123 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
COL1A2P08123 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms