Protein–RNA interactions for Protein: P40541

IRR1, Cohesin subunit SCC3, yeastyeast

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IRR1P40541 YOR282WYOR282W 321 nt3.27□□□□□ -1.89
IRR1P40541 snR36snR36 182 nt3.27□□□□□ -1.89
IRR1P40541 PSK1YAL017W 4071 nt3.27□□□□□ -1.89
IRR1P40541 YSP2YDR326C 4317 nt3.27□□□□□ -1.89
IRR1P40541 YMR158W-BYMR158W-B 321 nt3.26□□□□□ -1.89
IRR1P40541 YBL073WYBL073W 312 nt3.26□□□□□ -1.89
IRR1P40541 RPL25YOL127W 429 nt3.26□□□□□ -1.89
IRR1P40541 CDC24YAL041W 2565 nt3.26□□□□□ -1.89
IRR1P40541 PSY2YNL201C 2577 nt3.26□□□□□ -1.89
IRR1P40541 PCF11YDR228C 1881 nt3.26□□□□□ -1.89
IRR1P40541 STU2YLR045C 2667 nt3.26□□□□□ -1.89
IRR1P40541 ASG1YIL130W 2895 nt3.25□□□□□ -1.89
IRR1P40541 NAN1YPL126W 2691 nt3.25□□□□□ -1.89
IRR1P40541 RPL39YJL189W 156 nt3.25□□□□□ -1.89
IRR1P40541 YLR031WYLR031W 561 nt3.25□□□□□ -1.89
IRR1P40541 PGA1YNL158W 597 nt3.25□□□□□ -1.89
IRR1P40541 BAS1YKR099W 2436 nt3.25□□□□□ -1.89
IRR1P40541 TLC1TLC1 1301 nt3.24□□□□□ -1.89
IRR1P40541 YHR080CYHR080C 4038 nt3.24□□□□□ -1.89
IRR1P40541 YDL011CYDL011C 324 nt3.24□□□□□ -1.89
IRR1P40541 PAU10YDR542W 363 nt3.24□□□□□ -1.89
IRR1P40541 PAU11YGL261C 363 nt3.24□□□□□ -1.89
IRR1P40541 AYR1YIL124W 894 nt3.24□□□□□ -1.89
IRR1P40541 SHE2YKL130C 741 nt3.24□□□□□ -1.89
IRR1P40541 FRE2YKL220C 2136 nt3.24□□□□□ -1.89
IRR1P40541 YAR029WYAR029W 225 nt3.24□□□□□ -1.89
IRR1P40541 PAU4YLR461W 363 nt3.24□□□□□ -1.89
IRR1P40541 PUF6YDR496C 1971 nt3.23□□□□□ -1.89
IRR1P40541 RSN1YMR266W 2862 nt3.23□□□□□ -1.89
IRR1P40541 STE5YDR103W 2754 nt3.23□□□□□ -1.89
IRR1P40541 RPL26AYLR344W 384 nt3.23□□□□□ -1.89
IRR1P40541 ISF1YMR081C 1017 nt3.23□□□□□ -1.89
IRR1P40541 GOT1YMR292W 417 nt3.23□□□□□ -1.89
IRR1P40541 YOL019W-AYOL019W-A 153 nt3.23□□□□□ -1.89
IRR1P40541 REC8YPR007C 2043 nt3.23□□□□□ -1.89
IRR1P40541 VPS41YDR080W 2979 nt3.22□□□□□ -1.89
IRR1P40541 WIP1YDR374W-A 270 nt3.22□□□□□ -1.89
IRR1P40541 YER121WYER121W 345 nt3.22□□□□□ -1.89
IRR1P40541 YBR197CYBR197C 654 nt3.22□□□□□ -1.89
IRR1P40541 RGR1YLR071C 3249 nt3.22□□□□□ -1.89
IRR1P40541 KAP104YBR017C 2757 nt3.22□□□□□ -1.89
IRR1P40541 SNQ2YDR011W 4506 nt3.21□□□□□ -1.9
IRR1P40541 YBP1YBR216C 2025 nt3.21□□□□□ -1.9
IRR1P40541 snR76snR76 109 nt3.21□□□□□ -1.9
IRR1P40541 YDR193WYDR193W 399 nt3.21□□□□□ -1.9
IRR1P40541 FCF2YLR051C 654 nt3.21□□□□□ -1.9
IRR1P40541 RGM1YMR182C 636 nt3.21□□□□□ -1.9
IRR1P40541 NET1YJL076W 3570 nt3.21□□□□□ -1.9
IRR1P40541 TAO3YIL129C 7131 nt3.2□□□□□ -1.9
IRR1P40541 YMR324CYMR324C 243 nt3.2□□□□□ -1.9
IRR1P40541 YOR073W-AYOR073W-A 234 nt3.2□□□□□ -1.9
IRR1P40541 YPL182CYPL182C 384 nt3.2□□□□□ -1.9
IRR1P40541 YPL229WYPL229W 621 nt3.2□□□□□ -1.9
IRR1P40541 YPR146CYPR146C 330 nt3.2□□□□□ -1.9
IRR1P40541 VPS64YDR200C 1815 nt3.2□□□□□ -1.9
IRR1P40541 YDR183C-AYDR183C-A 258 nt3.19□□□□□ -1.9
IRR1P40541 DAD4YDR320C-A 219 nt3.19□□□□□ -1.9
IRR1P40541 PHD1YKL043W 1101 nt3.19□□□□□ -1.9
IRR1P40541 YPR010C-AYPR010C-A 219 nt3.19□□□□□ -1.9
IRR1P40541 DNL4YOR005C 2835 nt3.18□□□□□ -1.9
IRR1P40541 PSY1YKL076C 384 nt3.18□□□□□ -1.9
IRR1P40541 REV1YOR346W 2958 nt3.18□□□□□ -1.9
IRR1P40541 snR42snR42 351 nt3.18□□□□□ -1.9
IRR1P40541 CIN8YEL061C 3003 nt3.18□□□□□ -1.9
IRR1P40541 DYN2YDR424C 279 nt3.17□□□□□ -1.9
IRR1P40541 MZM1YDR493W 372 nt3.17□□□□□ -1.9
IRR1P40541 YMR290W-AYMR290W-A 348 nt3.17□□□□□ -1.9
IRR1P40541 ORC1YML065W 2745 nt3.16□□□□□ -1.9
IRR1P40541 HMRA2YCR096C 360 nt3.16□□□□□ -1.9
IRR1P40541 snR8snR8 190 nt3.16□□□□□ -1.9
IRR1P40541 YNL010WYNL010W 726 nt3.16□□□□□ -1.9
IRR1P40541 DRS2YAL026C 4068 nt3.16□□□□□ -1.9
IRR1P40541 GIN4YDR507C 3429 nt3.15□□□□□ -1.9
IRR1P40541 CHO2YGR157W 2610 nt3.15□□□□□ -1.9
IRR1P40541 RPS24AYER074W 408 nt3.15□□□□□ -1.91
IRR1P40541 LSO2YGR169C-A 279 nt3.15□□□□□ -1.91
IRR1P40541 YJL222W-BYJL222W-B 138 nt3.15□□□□□ -1.91
IRR1P40541 RPL20AYMR242C 519 nt3.15□□□□□ -1.91
IRR1P40541 RPL14BYHL001W 417 nt3.14□□□□□ -1.91
IRR1P40541 YOR050CYOR050C 348 nt3.14□□□□□ -1.91
IRR1P40541 ROG1YGL144C 2058 nt3.14□□□□□ -1.91
IRR1P40541 PRK1YIL095W 2433 nt3.14□□□□□ -1.91
IRR1P40541 AIM9YER080W 1884 nt3.13□□□□□ -1.91
IRR1P40541 IPT1YDR072C 1584 nt3.13□□□□□ -1.91
IRR1P40541 RKM1YPL208W 1752 nt3.13□□□□□ -1.91
IRR1P40541 BUD4YJR092W 4344 nt3.13□□□□□ -1.91
IRR1P40541 KAR3YPR141C 2190 nt3.13□□□□□ -1.91
IRR1P40541 tC(GCA)BtC(GCA)B 72 nt3.13□□□□□ -1.91
IRR1P40541 tC(GCA)GtC(GCA)G 72 nt3.13□□□□□ -1.91
IRR1P40541 YDR169C-AYDR169C-A 150 nt3.13□□□□□ -1.91
IRR1P40541 tC(GCA)P1tC(GCA)P1 72 nt3.13□□□□□ -1.91
IRR1P40541 tC(GCA)P2tC(GCA)P2 72 nt3.13□□□□□ -1.91
IRR1P40541 tF(GAA)DtF(GAA)D 73 nt3.13□□□□□ -1.91
IRR1P40541 tF(GAA)NtF(GAA)N 73 nt3.13□□□□□ -1.91
IRR1P40541 YGL014C-AYGL014C-A 162 nt3.13□□□□□ -1.91
IRR1P40541 YGL239CYGL239C 315 nt3.13□□□□□ -1.91
IRR1P40541 YGR174W-AYGR174W-A 87 nt3.13□□□□□ -1.91
IRR1P40541 YIL066W-AYIL066W-A 444 nt3.13□□□□□ -1.91
IRR1P40541 YJL020W-AYJL020W-A 258 nt3.13□□□□□ -1.91
IRR1P40541 YKR033CYKR033C 426 nt3.13□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 49.3 ms