Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Pspc1Q8R326 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pspc1Q8R326 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.37■■■□□ 2.13
Pspc1Q8R326 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Pspc1Q8R326 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Pspc1Q8R326 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC28.36■■■□□ 2.13
Pspc1Q8R326 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Pspc1Q8R326 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Pspc1Q8R326 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.35■■■□□ 2.13
Pspc1Q8R326 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
Pspc1Q8R326 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Pspc1Q8R326 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Pspc1Q8R326 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Pspc1Q8R326 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Pspc1Q8R326 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.33■■■□□ 2.13
Pspc1Q8R326 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Pspc1Q8R326 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Pspc1Q8R326 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Pspc1Q8R326 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Pspc1Q8R326 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Pspc1Q8R326 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.27■■■□□ 2.12
Pspc1Q8R326 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Pspc1Q8R326 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pspc1Q8R326 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.24■■■□□ 2.11
Pspc1Q8R326 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Pspc1Q8R326 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Pspc1Q8R326 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pspc1Q8R326 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.23■■■□□ 2.11
Pspc1Q8R326 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Pspc1Q8R326 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Pspc1Q8R326 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Pspc1Q8R326 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
Pspc1Q8R326 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.2■■■□□ 2.1
Pspc1Q8R326 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Pspc1Q8R326 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Pspc1Q8R326 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.19■■■□□ 2.1
Pspc1Q8R326 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.18■■■□□ 2.1
Pspc1Q8R326 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Pspc1Q8R326 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Pspc1Q8R326 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pspc1Q8R326 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pspc1Q8R326 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pspc1Q8R326 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.17■■■□□ 2.1
Pspc1Q8R326 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pspc1Q8R326 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Pspc1Q8R326 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Pspc1Q8R326 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Pspc1Q8R326 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Pspc1Q8R326 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Pspc1Q8R326 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Pspc1Q8R326 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.11■■■□□ 2.09
Pspc1Q8R326 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.11■■■□□ 2.09
Pspc1Q8R326 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
Pspc1Q8R326 Gm7432-201ENSMUST00000210343 879 ntBASIC28.09■■■□□ 2.09
Pspc1Q8R326 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Pspc1Q8R326 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Pspc1Q8R326 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.06■■■□□ 2.08
Pspc1Q8R326 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.06■■■□□ 2.08
Pspc1Q8R326 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.06■■■□□ 2.08
Pspc1Q8R326 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
Pspc1Q8R326 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Pspc1Q8R326 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Pspc1Q8R326 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pspc1Q8R326 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Pspc1Q8R326 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.03■■■□□ 2.08
Pspc1Q8R326 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Pspc1Q8R326 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pspc1Q8R326 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Pspc1Q8R326 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Pspc1Q8R326 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28■■■□□ 2.07
Pspc1Q8R326 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
Pspc1Q8R326 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28■■■□□ 2.07
Pspc1Q8R326 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.97■■■□□ 2.07
Pspc1Q8R326 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.97■■■□□ 2.07
Pspc1Q8R326 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
Pspc1Q8R326 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.97■■■□□ 2.07
Pspc1Q8R326 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
Pspc1Q8R326 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
Pspc1Q8R326 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Pspc1Q8R326 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Pspc1Q8R326 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.95■■■□□ 2.06
Pspc1Q8R326 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.94■■■□□ 2.06
Pspc1Q8R326 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Pspc1Q8R326 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Pspc1Q8R326 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Pspc1Q8R326 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.93■■■□□ 2.06
Pspc1Q8R326 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Pspc1Q8R326 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.92■■■□□ 2.06
Pspc1Q8R326 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Pspc1Q8R326 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
Pspc1Q8R326 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Pspc1Q8R326 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Pspc1Q8R326 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Pspc1Q8R326 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.89■■■□□ 2.06
Pspc1Q8R326 Gm11599-201ENSMUST00000118720 878 ntBASIC27.89■■■□□ 2.06
Pspc1Q8R326 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.89■■■□□ 2.06
Pspc1Q8R326 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Pspc1Q8R326 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.88■■■□□ 2.05
Pspc1Q8R326 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.88■■■□□ 2.05
Pspc1Q8R326 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.88■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms