Protein–RNA interactions for Protein: Q8K375

Lrrc56, Leucine-rich repeat-containing protein 56, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc56Q8K375 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Lrrc56Q8K375 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Lrrc56Q8K375 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Lrrc56Q8K375 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Lrrc56Q8K375 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Lrrc56Q8K375 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.59■■■□□ 2.01
Lrrc56Q8K375 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.58■■■□□ 2.01
Lrrc56Q8K375 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Lrrc56Q8K375 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
Lrrc56Q8K375 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.54■■■□□ 2
Lrrc56Q8K375 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.54■■■□□ 2
Lrrc56Q8K375 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Lrrc56Q8K375 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Lrrc56Q8K375 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.52■■■□□ 2
Lrrc56Q8K375 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Lrrc56Q8K375 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Lrrc56Q8K375 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.5■■□□□ 1.99
Lrrc56Q8K375 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Lrrc56Q8K375 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.49■■□□□ 1.99
Lrrc56Q8K375 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Lrrc56Q8K375 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Lrrc56Q8K375 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Lrrc56Q8K375 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Lrrc56Q8K375 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Lrrc56Q8K375 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Lrrc56Q8K375 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.45■■□□□ 1.98
Lrrc56Q8K375 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.45■■□□□ 1.98
Lrrc56Q8K375 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Lrrc56Q8K375 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.44■■□□□ 1.98
Lrrc56Q8K375 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Lrrc56Q8K375 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Lrrc56Q8K375 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Lrrc56Q8K375 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Lrrc56Q8K375 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Lrrc56Q8K375 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Lrrc56Q8K375 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Lrrc56Q8K375 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.41■■□□□ 1.98
Lrrc56Q8K375 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Lrrc56Q8K375 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
Lrrc56Q8K375 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.4■■□□□ 1.98
Lrrc56Q8K375 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
Lrrc56Q8K375 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
Lrrc56Q8K375 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Lrrc56Q8K375 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.38■■□□□ 1.97
Lrrc56Q8K375 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Lrrc56Q8K375 Gm11175-201ENSMUST00000116172 543 ntBASIC27.38■■□□□ 1.97
Lrrc56Q8K375 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Lrrc56Q8K375 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Lrrc56Q8K375 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.37■■□□□ 1.97
Lrrc56Q8K375 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.36■■□□□ 1.97
Lrrc56Q8K375 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
Lrrc56Q8K375 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.35■■□□□ 1.97
Lrrc56Q8K375 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Lrrc56Q8K375 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Lrrc56Q8K375 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
Lrrc56Q8K375 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Lrrc56Q8K375 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Lrrc56Q8K375 Mir6538-201ENSMUST00000183713 110 ntBASIC27.32■■□□□ 1.96
Lrrc56Q8K375 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Lrrc56Q8K375 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Lrrc56Q8K375 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Lrrc56Q8K375 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.31■■□□□ 1.96
Lrrc56Q8K375 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Lrrc56Q8K375 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
Lrrc56Q8K375 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Lrrc56Q8K375 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Lrrc56Q8K375 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Lrrc56Q8K375 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.26■■□□□ 1.95
Lrrc56Q8K375 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Lrrc56Q8K375 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Lrrc56Q8K375 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
Lrrc56Q8K375 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
Lrrc56Q8K375 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Lrrc56Q8K375 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Lrrc56Q8K375 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Lrrc56Q8K375 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
Lrrc56Q8K375 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Lrrc56Q8K375 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Lrrc56Q8K375 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Lrrc56Q8K375 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Lrrc56Q8K375 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
Lrrc56Q8K375 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Lrrc56Q8K375 Gm30023-201ENSMUST00000197970 889 ntBASIC27.19■■□□□ 1.94
Lrrc56Q8K375 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Lrrc56Q8K375 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Lrrc56Q8K375 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.17■■□□□ 1.94
Lrrc56Q8K375 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.16■■□□□ 1.94
Lrrc56Q8K375 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Lrrc56Q8K375 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Lrrc56Q8K375 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
Lrrc56Q8K375 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
Lrrc56Q8K375 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Lrrc56Q8K375 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.12■■□□□ 1.93
Lrrc56Q8K375 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Lrrc56Q8K375 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Lrrc56Q8K375 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Lrrc56Q8K375 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Lrrc56Q8K375 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Lrrc56Q8K375 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Lrrc56Q8K375 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms