Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Pcf11-205ENSMUST00000208255 1720 ntBASIC30.44■■■□□ 2.46
Smc5Q8CG46 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Smc5Q8CG46 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Smc5Q8CG46 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Smc5Q8CG46 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Smc5Q8CG46 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Smc5Q8CG46 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
Smc5Q8CG46 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC30.39■■■□□ 2.46
Smc5Q8CG46 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.39■■■□□ 2.45
Smc5Q8CG46 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Smc5Q8CG46 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Smc5Q8CG46 Gm24804-201ENSMUST00000174982 85 ntBASIC30.37■■■□□ 2.45
Smc5Q8CG46 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Smc5Q8CG46 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Smc5Q8CG46 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Smc5Q8CG46 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Smc5Q8CG46 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Smc5Q8CG46 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Smc5Q8CG46 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Smc5Q8CG46 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Smc5Q8CG46 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Smc5Q8CG46 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Smc5Q8CG46 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Smc5Q8CG46 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Smc5Q8CG46 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
Smc5Q8CG46 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Smc5Q8CG46 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Smc5Q8CG46 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Smc5Q8CG46 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Smc5Q8CG46 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
Smc5Q8CG46 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Smc5Q8CG46 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Smc5Q8CG46 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.3■■■□□ 2.44
Smc5Q8CG46 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Smc5Q8CG46 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC30.29■■■□□ 2.44
Smc5Q8CG46 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Smc5Q8CG46 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC30.29■■■□□ 2.44
Smc5Q8CG46 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Smc5Q8CG46 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Smc5Q8CG46 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC30.28■■■□□ 2.44
Smc5Q8CG46 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Smc5Q8CG46 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
Smc5Q8CG46 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Smc5Q8CG46 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Smc5Q8CG46 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Smc5Q8CG46 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Smc5Q8CG46 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Smc5Q8CG46 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Smc5Q8CG46 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.24■■■□□ 2.43
Smc5Q8CG46 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Smc5Q8CG46 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.23■■■□□ 2.43
Smc5Q8CG46 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Smc5Q8CG46 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30.22■■■□□ 2.43
Smc5Q8CG46 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Smc5Q8CG46 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Smc5Q8CG46 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Smc5Q8CG46 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Smc5Q8CG46 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Smc5Q8CG46 Gm16148-201ENSMUST00000119653 893 ntBASIC30.2■■■□□ 2.43
Smc5Q8CG46 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC30.19■■■□□ 2.42
Smc5Q8CG46 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Smc5Q8CG46 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Smc5Q8CG46 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Smc5Q8CG46 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
Smc5Q8CG46 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Smc5Q8CG46 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
Smc5Q8CG46 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Smc5Q8CG46 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Smc5Q8CG46 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Smc5Q8CG46 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Smc5Q8CG46 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Smc5Q8CG46 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Smc5Q8CG46 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC30.06■■■□□ 2.4
Smc5Q8CG46 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Smc5Q8CG46 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Smc5Q8CG46 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Smc5Q8CG46 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
Smc5Q8CG46 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Smc5Q8CG46 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC30.03■■■□□ 2.4
Smc5Q8CG46 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Smc5Q8CG46 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Smc5Q8CG46 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Smc5Q8CG46 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Smc5Q8CG46 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Smc5Q8CG46 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
Smc5Q8CG46 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.98■■■□□ 2.39
Smc5Q8CG46 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Smc5Q8CG46 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
Smc5Q8CG46 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Smc5Q8CG46 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC29.95■■■□□ 2.39
Smc5Q8CG46 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Smc5Q8CG46 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Smc5Q8CG46 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Smc5Q8CG46 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Smc5Q8CG46 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC29.92■■■□□ 2.38
Smc5Q8CG46 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Smc5Q8CG46 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Smc5Q8CG46 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Smc5Q8CG46 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Smc5Q8CG46 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms