Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Ptcd1Q8C2E4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ptcd1Q8C2E4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ptcd1Q8C2E4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Ptcd1Q8C2E4 Cap2-205ENSMUST00000225824 1634 ntBASIC30.38■■■□□ 2.45
Ptcd1Q8C2E4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Ptcd1Q8C2E4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
Ptcd1Q8C2E4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
Ptcd1Q8C2E4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.37■■■□□ 2.45
Ptcd1Q8C2E4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC30.37■■■□□ 2.45
Ptcd1Q8C2E4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
Ptcd1Q8C2E4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.37■■■□□ 2.45
Ptcd1Q8C2E4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC30.36■■■□□ 2.45
Ptcd1Q8C2E4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.36■■■□□ 2.45
Ptcd1Q8C2E4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ptcd1Q8C2E4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
Ptcd1Q8C2E4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC30.33■■■□□ 2.45
Ptcd1Q8C2E4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.45
Ptcd1Q8C2E4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ptcd1Q8C2E4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.31■■■□□ 2.44
Ptcd1Q8C2E4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC30.3■■■□□ 2.44
Ptcd1Q8C2E4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ptcd1Q8C2E4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ptcd1Q8C2E4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ptcd1Q8C2E4 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.27■■■□□ 2.44
Ptcd1Q8C2E4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.27■■■□□ 2.44
Ptcd1Q8C2E4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ptcd1Q8C2E4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Ptcd1Q8C2E4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ptcd1Q8C2E4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.26■■■□□ 2.44
Ptcd1Q8C2E4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Ptcd1Q8C2E4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30.26■■■□□ 2.43
Ptcd1Q8C2E4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ptcd1Q8C2E4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ptcd1Q8C2E4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Ptcd1Q8C2E4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30.24■■■□□ 2.43
Ptcd1Q8C2E4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Ptcd1Q8C2E4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
Ptcd1Q8C2E4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
Ptcd1Q8C2E4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ptcd1Q8C2E4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.22■■■□□ 2.43
Ptcd1Q8C2E4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Ptcd1Q8C2E4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
Ptcd1Q8C2E4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC30.2■■■□□ 2.43
Ptcd1Q8C2E4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30.2■■■□□ 2.43
Ptcd1Q8C2E4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC30.19■■■□□ 2.42
Ptcd1Q8C2E4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Ptcd1Q8C2E4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ptcd1Q8C2E4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Ptcd1Q8C2E4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Ptcd1Q8C2E4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30.15■■■□□ 2.42
Ptcd1Q8C2E4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Ptcd1Q8C2E4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Ptcd1Q8C2E4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC30.12■■■□□ 2.41
Ptcd1Q8C2E4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ptcd1Q8C2E4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
Ptcd1Q8C2E4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ptcd1Q8C2E4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Ptcd1Q8C2E4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ptcd1Q8C2E4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ptcd1Q8C2E4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ptcd1Q8C2E4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ptcd1Q8C2E4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ptcd1Q8C2E4 Gm6311-201ENSMUST00000073790 878 ntBASIC30.08■■■□□ 2.41
Ptcd1Q8C2E4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
Ptcd1Q8C2E4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ptcd1Q8C2E4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ptcd1Q8C2E4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ptcd1Q8C2E4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ptcd1Q8C2E4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC30.04■■■□□ 2.4
Ptcd1Q8C2E4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC30.03■■■□□ 2.4
Ptcd1Q8C2E4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.02■■■□□ 2.4
Ptcd1Q8C2E4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ptcd1Q8C2E4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
Ptcd1Q8C2E4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ptcd1Q8C2E4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Ptcd1Q8C2E4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Ptcd1Q8C2E4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC29.99■■■□□ 2.39
Ptcd1Q8C2E4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Ptcd1Q8C2E4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ptcd1Q8C2E4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ptcd1Q8C2E4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.98■■■□□ 2.39
Ptcd1Q8C2E4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ptcd1Q8C2E4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ptcd1Q8C2E4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Ptcd1Q8C2E4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC29.95■■■□□ 2.39
Ptcd1Q8C2E4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Ptcd1Q8C2E4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Ptcd1Q8C2E4 Gm6345-201ENSMUST00000180378 1691 ntBASIC29.93■■■□□ 2.38
Ptcd1Q8C2E4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
Ptcd1Q8C2E4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
Ptcd1Q8C2E4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Ptcd1Q8C2E4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC29.91■■■□□ 2.38
Ptcd1Q8C2E4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Ptcd1Q8C2E4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC29.9■■■□□ 2.38
Ptcd1Q8C2E4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Ptcd1Q8C2E4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Ptcd1Q8C2E4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Ptcd1Q8C2E4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC29.89■■■□□ 2.38
Ptcd1Q8C2E4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC29.88■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms