Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sh3rf2Q8BZT2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Sh3rf2Q8BZT2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.04■■□□□ 1.6
Sh3rf2Q8BZT2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Sh3rf2Q8BZT2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sh3rf2Q8BZT2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sh3rf2Q8BZT2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Sh3rf2Q8BZT2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sh3rf2Q8BZT2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Sh3rf2Q8BZT2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Sh3rf2Q8BZT2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Sh3rf2Q8BZT2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Sh3rf2Q8BZT2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Sh3rf2Q8BZT2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.97■■□□□ 1.59
Sh3rf2Q8BZT2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Sh3rf2Q8BZT2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Sh3rf2Q8BZT2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.97■■□□□ 1.59
Sh3rf2Q8BZT2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Sh3rf2Q8BZT2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Sh3rf2Q8BZT2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Sh3rf2Q8BZT2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Sh3rf2Q8BZT2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Sh3rf2Q8BZT2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.93■■□□□ 1.58
Sh3rf2Q8BZT2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Sh3rf2Q8BZT2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sh3rf2Q8BZT2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.91■■□□□ 1.58
Sh3rf2Q8BZT2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.91■■□□□ 1.58
Sh3rf2Q8BZT2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Sh3rf2Q8BZT2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Sh3rf2Q8BZT2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Sh3rf2Q8BZT2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.89■■□□□ 1.58
Sh3rf2Q8BZT2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Sh3rf2Q8BZT2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
Sh3rf2Q8BZT2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Sh3rf2Q8BZT2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Sh3rf2Q8BZT2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Sh3rf2Q8BZT2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.83■■□□□ 1.57
Sh3rf2Q8BZT2 Gm7432-201ENSMUST00000210343 879 ntBASIC24.83■■□□□ 1.57
Sh3rf2Q8BZT2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sh3rf2Q8BZT2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
Sh3rf2Q8BZT2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.83■■□□□ 1.56
Sh3rf2Q8BZT2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Sh3rf2Q8BZT2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Sh3rf2Q8BZT2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.81■■□□□ 1.56
Sh3rf2Q8BZT2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sh3rf2Q8BZT2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sh3rf2Q8BZT2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
Sh3rf2Q8BZT2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Sh3rf2Q8BZT2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.8■■□□□ 1.56
Sh3rf2Q8BZT2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Sh3rf2Q8BZT2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Sh3rf2Q8BZT2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Sh3rf2Q8BZT2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Sh3rf2Q8BZT2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.78■■□□□ 1.56
Sh3rf2Q8BZT2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.78■■□□□ 1.56
Sh3rf2Q8BZT2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.78■■□□□ 1.56
Sh3rf2Q8BZT2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.77■■□□□ 1.56
Sh3rf2Q8BZT2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.76■■□□□ 1.55
Sh3rf2Q8BZT2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Sh3rf2Q8BZT2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Sh3rf2Q8BZT2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.75■■□□□ 1.55
Sh3rf2Q8BZT2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Sh3rf2Q8BZT2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Sh3rf2Q8BZT2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Sh3rf2Q8BZT2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Sh3rf2Q8BZT2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sh3rf2Q8BZT2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Sh3rf2Q8BZT2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Sh3rf2Q8BZT2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Sh3rf2Q8BZT2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.73■■□□□ 1.55
Sh3rf2Q8BZT2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Sh3rf2Q8BZT2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Sh3rf2Q8BZT2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.72■■□□□ 1.55
Sh3rf2Q8BZT2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sh3rf2Q8BZT2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.71■■□□□ 1.55
Sh3rf2Q8BZT2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.71■■□□□ 1.55
Sh3rf2Q8BZT2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
Sh3rf2Q8BZT2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Sh3rf2Q8BZT2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.69■■□□□ 1.54
Sh3rf2Q8BZT2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.68■■□□□ 1.54
Sh3rf2Q8BZT2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.68■■□□□ 1.54
Sh3rf2Q8BZT2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Sh3rf2Q8BZT2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Sh3rf2Q8BZT2 Gm11599-201ENSMUST00000118720 878 ntBASIC24.67■■□□□ 1.54
Sh3rf2Q8BZT2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.67■■□□□ 1.54
Sh3rf2Q8BZT2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Sh3rf2Q8BZT2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sh3rf2Q8BZT2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Sh3rf2Q8BZT2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Sh3rf2Q8BZT2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sh3rf2Q8BZT2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Sh3rf2Q8BZT2 Gm30023-201ENSMUST00000197970 889 ntBASIC24.64■■□□□ 1.54
Sh3rf2Q8BZT2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Sh3rf2Q8BZT2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sh3rf2Q8BZT2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sh3rf2Q8BZT2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sh3rf2Q8BZT2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sh3rf2Q8BZT2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sh3rf2Q8BZT2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sh3rf2Q8BZT2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms