Protein–RNA interactions for Protein: Q8BY02

Nkrf, NF-kappa-B-repressing factor, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NkrfQ8BY02 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
NkrfQ8BY02 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
NkrfQ8BY02 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
NkrfQ8BY02 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
NkrfQ8BY02 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
NkrfQ8BY02 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
NkrfQ8BY02 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
NkrfQ8BY02 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
NkrfQ8BY02 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
NkrfQ8BY02 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
NkrfQ8BY02 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
NkrfQ8BY02 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.59■■■□□ 2.01
NkrfQ8BY02 Gm7432-201ENSMUST00000210343 879 ntBASIC27.59■■■□□ 2.01
NkrfQ8BY02 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
NkrfQ8BY02 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
NkrfQ8BY02 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.58■■■□□ 2.01
NkrfQ8BY02 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
NkrfQ8BY02 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.57■■■□□ 2
NkrfQ8BY02 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
NkrfQ8BY02 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.56■■■□□ 2
NkrfQ8BY02 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
NkrfQ8BY02 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
NkrfQ8BY02 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
NkrfQ8BY02 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.54■■■□□ 2
NkrfQ8BY02 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
NkrfQ8BY02 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.53■■■□□ 2
NkrfQ8BY02 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
NkrfQ8BY02 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
NkrfQ8BY02 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.52■■■□□ 2
NkrfQ8BY02 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
NkrfQ8BY02 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
NkrfQ8BY02 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.5■■□□□ 1.99
NkrfQ8BY02 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.49■■□□□ 1.99
NkrfQ8BY02 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
NkrfQ8BY02 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
NkrfQ8BY02 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.48■■□□□ 1.99
NkrfQ8BY02 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
NkrfQ8BY02 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
NkrfQ8BY02 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
NkrfQ8BY02 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.46■■□□□ 1.99
NkrfQ8BY02 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.44■■□□□ 1.98
NkrfQ8BY02 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
NkrfQ8BY02 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
NkrfQ8BY02 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.43■■□□□ 1.98
NkrfQ8BY02 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
NkrfQ8BY02 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NkrfQ8BY02 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.41■■□□□ 1.98
NkrfQ8BY02 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
NkrfQ8BY02 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
NkrfQ8BY02 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
NkrfQ8BY02 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
NkrfQ8BY02 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
NkrfQ8BY02 Gm11599-201ENSMUST00000118720 878 ntBASIC27.36■■□□□ 1.97
NkrfQ8BY02 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
NkrfQ8BY02 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
NkrfQ8BY02 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
NkrfQ8BY02 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.34■■□□□ 1.97
NkrfQ8BY02 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
NkrfQ8BY02 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
NkrfQ8BY02 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
NkrfQ8BY02 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.32■■□□□ 1.96
NkrfQ8BY02 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.32■■□□□ 1.96
NkrfQ8BY02 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
NkrfQ8BY02 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.31■■□□□ 1.96
NkrfQ8BY02 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
NkrfQ8BY02 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
NkrfQ8BY02 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
NkrfQ8BY02 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NkrfQ8BY02 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NkrfQ8BY02 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
NkrfQ8BY02 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.26■■□□□ 1.95
NkrfQ8BY02 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.26■■□□□ 1.95
NkrfQ8BY02 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
NkrfQ8BY02 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
NkrfQ8BY02 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.24■■□□□ 1.95
NkrfQ8BY02 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
NkrfQ8BY02 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.24■■□□□ 1.95
NkrfQ8BY02 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.23■■□□□ 1.95
NkrfQ8BY02 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
NkrfQ8BY02 Amer2-203ENSMUST00000225247 2662 ntBASIC27.21■■□□□ 1.95
NkrfQ8BY02 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
NkrfQ8BY02 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
NkrfQ8BY02 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
NkrfQ8BY02 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
NkrfQ8BY02 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
NkrfQ8BY02 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
NkrfQ8BY02 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.18■■□□□ 1.94
NkrfQ8BY02 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
NkrfQ8BY02 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
NkrfQ8BY02 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.18■■□□□ 1.94
NkrfQ8BY02 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.18■■□□□ 1.94
NkrfQ8BY02 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
NkrfQ8BY02 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
NkrfQ8BY02 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.17■■□□□ 1.94
NkrfQ8BY02 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
NkrfQ8BY02 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.16■■□□□ 1.94
NkrfQ8BY02 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.16■■□□□ 1.94
NkrfQ8BY02 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
NkrfQ8BY02 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
NkrfQ8BY02 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms