Protein–RNA interactions for Protein: Q8BM92

Cdh7, Cadherin-7, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh7Q8BM92 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cdh7Q8BM92 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cdh7Q8BM92 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Cdh7Q8BM92 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Cdh7Q8BM92 Gm11599-201ENSMUST00000118720 878 ntBASIC24.7■■□□□ 1.54
Cdh7Q8BM92 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.7■■□□□ 1.54
Cdh7Q8BM92 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Cdh7Q8BM92 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Cdh7Q8BM92 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cdh7Q8BM92 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.68■■□□□ 1.54
Cdh7Q8BM92 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.67■■□□□ 1.54
Cdh7Q8BM92 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Cdh7Q8BM92 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cdh7Q8BM92 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cdh7Q8BM92 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Cdh7Q8BM92 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Cdh7Q8BM92 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Cdh7Q8BM92 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.63■■□□□ 1.53
Cdh7Q8BM92 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Cdh7Q8BM92 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.63■■□□□ 1.53
Cdh7Q8BM92 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Cdh7Q8BM92 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Cdh7Q8BM92 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.62■■□□□ 1.53
Cdh7Q8BM92 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cdh7Q8BM92 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.58■■□□□ 1.53
Cdh7Q8BM92 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.58■■□□□ 1.53
Cdh7Q8BM92 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cdh7Q8BM92 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cdh7Q8BM92 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Cdh7Q8BM92 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cdh7Q8BM92 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cdh7Q8BM92 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Cdh7Q8BM92 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.55■■□□□ 1.52
Cdh7Q8BM92 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Cdh7Q8BM92 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Cdh7Q8BM92 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cdh7Q8BM92 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cdh7Q8BM92 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Cdh7Q8BM92 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.54■■□□□ 1.52
Cdh7Q8BM92 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cdh7Q8BM92 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.53■■□□□ 1.52
Cdh7Q8BM92 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cdh7Q8BM92 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.53■■□□□ 1.52
Cdh7Q8BM92 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.52■■□□□ 1.52
Cdh7Q8BM92 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cdh7Q8BM92 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.51■■□□□ 1.51
Cdh7Q8BM92 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Cdh7Q8BM92 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.51■■□□□ 1.51
Cdh7Q8BM92 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Cdh7Q8BM92 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.51■■□□□ 1.51
Cdh7Q8BM92 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.51■■□□□ 1.51
Cdh7Q8BM92 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Cdh7Q8BM92 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Cdh7Q8BM92 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Cdh7Q8BM92 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cdh7Q8BM92 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cdh7Q8BM92 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cdh7Q8BM92 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cdh7Q8BM92 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cdh7Q8BM92 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cdh7Q8BM92 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cdh7Q8BM92 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cdh7Q8BM92 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Cdh7Q8BM92 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Cdh7Q8BM92 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Cdh7Q8BM92 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cdh7Q8BM92 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cdh7Q8BM92 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.42■■□□□ 1.5
Cdh7Q8BM92 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.42■■□□□ 1.5
Cdh7Q8BM92 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.42■■□□□ 1.5
Cdh7Q8BM92 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.42■■□□□ 1.5
Cdh7Q8BM92 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.4■■□□□ 1.5
Cdh7Q8BM92 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.4■■□□□ 1.5
Cdh7Q8BM92 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Cdh7Q8BM92 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.39■■□□□ 1.49
Cdh7Q8BM92 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Cdh7Q8BM92 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Cdh7Q8BM92 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Cdh7Q8BM92 Mir6538-201ENSMUST00000183713 110 ntBASIC24.37■■□□□ 1.49
Cdh7Q8BM92 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cdh7Q8BM92 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Cdh7Q8BM92 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cdh7Q8BM92 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Cdh7Q8BM92 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.35■■□□□ 1.49
Cdh7Q8BM92 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
Cdh7Q8BM92 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cdh7Q8BM92 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
Cdh7Q8BM92 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cdh7Q8BM92 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cdh7Q8BM92 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.34■■□□□ 1.49
Cdh7Q8BM92 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cdh7Q8BM92 Gm11175-201ENSMUST00000116172 543 ntBASIC24.32■■□□□ 1.48
Cdh7Q8BM92 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cdh7Q8BM92 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cdh7Q8BM92 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
Cdh7Q8BM92 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cdh7Q8BM92 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Cdh7Q8BM92 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Cdh7Q8BM92 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cdh7Q8BM92 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms