Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Trim62Q80V85 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Trim62Q80V85 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Trim62Q80V85 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim62Q80V85 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim62Q80V85 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim62Q80V85 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim62Q80V85 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim62Q80V85 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim62Q80V85 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim62Q80V85 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.36■■□□□ 1.65
Trim62Q80V85 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Trim62Q80V85 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim62Q80V85 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Trim62Q80V85 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trim62Q80V85 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Trim62Q80V85 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim62Q80V85 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Trim62Q80V85 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Trim62Q80V85 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trim62Q80V85 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Trim62Q80V85 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.32■■□□□ 1.64
Trim62Q80V85 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Trim62Q80V85 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim62Q80V85 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trim62Q80V85 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Trim62Q80V85 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trim62Q80V85 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim62Q80V85 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Trim62Q80V85 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.28■■□□□ 1.64
Trim62Q80V85 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Trim62Q80V85 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.28■■□□□ 1.64
Trim62Q80V85 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trim62Q80V85 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.27■■□□□ 1.64
Trim62Q80V85 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Trim62Q80V85 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trim62Q80V85 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim62Q80V85 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim62Q80V85 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim62Q80V85 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim62Q80V85 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim62Q80V85 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Trim62Q80V85 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Trim62Q80V85 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Trim62Q80V85 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Trim62Q80V85 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
Trim62Q80V85 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Trim62Q80V85 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Trim62Q80V85 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
Trim62Q80V85 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Trim62Q80V85 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Trim62Q80V85 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
Trim62Q80V85 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim62Q80V85 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim62Q80V85 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trim62Q80V85 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trim62Q80V85 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Trim62Q80V85 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.15■■□□□ 1.62
Trim62Q80V85 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Trim62Q80V85 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim62Q80V85 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
Trim62Q80V85 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim62Q80V85 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Trim62Q80V85 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim62Q80V85 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Trim62Q80V85 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim62Q80V85 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Trim62Q80V85 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim62Q80V85 Nkain2-201ENSMUST00000092602 558 ntBASIC25.11■■□□□ 1.61
Trim62Q80V85 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Trim62Q80V85 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
Trim62Q80V85 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Trim62Q80V85 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trim62Q80V85 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.07■■□□□ 1.6
Trim62Q80V85 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trim62Q80V85 Gm6821-201ENSMUST00000107540 542 ntBASIC25.06■■□□□ 1.6
Trim62Q80V85 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.06■■□□□ 1.6
Trim62Q80V85 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.06■■□□□ 1.6
Trim62Q80V85 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Trim62Q80V85 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.06■■□□□ 1.6
Trim62Q80V85 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.05■■□□□ 1.6
Trim62Q80V85 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trim62Q80V85 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.04■■□□□ 1.6
Trim62Q80V85 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Trim62Q80V85 Gm8503-201ENSMUST00000118131 455 ntBASIC25.01■■□□□ 1.59
Trim62Q80V85 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Trim62Q80V85 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25■■□□□ 1.59
Trim62Q80V85 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.98■■□□□ 1.59
Trim62Q80V85 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.97■■□□□ 1.59
Trim62Q80V85 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.97■■□□□ 1.59
Trim62Q80V85 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Trim62Q80V85 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Trim62Q80V85 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
Trim62Q80V85 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim62Q80V85 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.95■■□□□ 1.58
Trim62Q80V85 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trim62Q80V85 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.95■■□□□ 1.58
Trim62Q80V85 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.94■■□□□ 1.58
Trim62Q80V85 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trim62Q80V85 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms