Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Trim62Q80V85 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Trim62Q80V85 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Trim62Q80V85 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim62Q80V85 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trim62Q80V85 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim62Q80V85 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim62Q80V85 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim62Q80V85 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim62Q80V85 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim62Q80V85 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.36■■□□□ 1.65
Trim62Q80V85 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Trim62Q80V85 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trim62Q80V85 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Trim62Q80V85 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trim62Q80V85 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Trim62Q80V85 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim62Q80V85 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Trim62Q80V85 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Trim62Q80V85 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trim62Q80V85 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Trim62Q80V85 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.32■■□□□ 1.64
Trim62Q80V85 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Trim62Q80V85 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim62Q80V85 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trim62Q80V85 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Trim62Q80V85 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trim62Q80V85 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trim62Q80V85 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Trim62Q80V85 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.28■■□□□ 1.64
Trim62Q80V85 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Trim62Q80V85 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.28■■□□□ 1.64
Trim62Q80V85 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trim62Q80V85 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.27■■□□□ 1.64
Trim62Q80V85 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Trim62Q80V85 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trim62Q80V85 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim62Q80V85 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim62Q80V85 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim62Q80V85 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim62Q80V85 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim62Q80V85 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Trim62Q80V85 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Trim62Q80V85 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Trim62Q80V85 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Trim62Q80V85 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
Trim62Q80V85 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Trim62Q80V85 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Trim62Q80V85 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
Trim62Q80V85 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Trim62Q80V85 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Trim62Q80V85 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
Trim62Q80V85 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim62Q80V85 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trim62Q80V85 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trim62Q80V85 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trim62Q80V85 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Trim62Q80V85 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.15■■□□□ 1.62
Trim62Q80V85 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Trim62Q80V85 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim62Q80V85 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
Trim62Q80V85 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim62Q80V85 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Trim62Q80V85 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim62Q80V85 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Trim62Q80V85 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim62Q80V85 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Trim62Q80V85 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim62Q80V85 Nkain2-201ENSMUST00000092602 558 ntBASIC25.11■■□□□ 1.61
Trim62Q80V85 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Trim62Q80V85 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
Trim62Q80V85 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Trim62Q80V85 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trim62Q80V85 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.07■■□□□ 1.6
Trim62Q80V85 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trim62Q80V85 Gm6821-201ENSMUST00000107540 542 ntBASIC25.06■■□□□ 1.6
Trim62Q80V85 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.06■■□□□ 1.6
Trim62Q80V85 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.06■■□□□ 1.6
Trim62Q80V85 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Trim62Q80V85 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.06■■□□□ 1.6
Trim62Q80V85 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.05■■□□□ 1.6
Trim62Q80V85 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trim62Q80V85 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.04■■□□□ 1.6
Trim62Q80V85 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Trim62Q80V85 Gm8503-201ENSMUST00000118131 455 ntBASIC25.01■■□□□ 1.59
Trim62Q80V85 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Trim62Q80V85 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25■■□□□ 1.59
Trim62Q80V85 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.98■■□□□ 1.59
Trim62Q80V85 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.97■■□□□ 1.59
Trim62Q80V85 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.97■■□□□ 1.59
Trim62Q80V85 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Trim62Q80V85 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Trim62Q80V85 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
Trim62Q80V85 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trim62Q80V85 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.95■■□□□ 1.58
Trim62Q80V85 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trim62Q80V85 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.95■■□□□ 1.58
Trim62Q80V85 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.94■■□□□ 1.58
Trim62Q80V85 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trim62Q80V85 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms