Protein–RNA interactions for Protein: Q6YI28

2210407C18Rik, EP1, mousemouse

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210407C18RikQ6YI28 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.5■■□□□ 1.03
2210407C18RikQ6YI28 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
2210407C18RikQ6YI28 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
2210407C18RikQ6YI28 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
2210407C18RikQ6YI28 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
2210407C18RikQ6YI28 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
2210407C18RikQ6YI28 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
2210407C18RikQ6YI28 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
2210407C18RikQ6YI28 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
2210407C18RikQ6YI28 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
2210407C18RikQ6YI28 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.45■■□□□ 1.02
2210407C18RikQ6YI28 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
2210407C18RikQ6YI28 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
2210407C18RikQ6YI28 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
2210407C18RikQ6YI28 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
2210407C18RikQ6YI28 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
2210407C18RikQ6YI28 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
2210407C18RikQ6YI28 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
2210407C18RikQ6YI28 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.43■■□□□ 1.02
2210407C18RikQ6YI28 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
2210407C18RikQ6YI28 Gm9397-201ENSMUST00000200125 605 ntBASIC21.4■■□□□ 1.02
2210407C18RikQ6YI28 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
2210407C18RikQ6YI28 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.39■■□□□ 1.02
2210407C18RikQ6YI28 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
2210407C18RikQ6YI28 Gm45855-201ENSMUST00000212546 880 ntBASIC21.38■■□□□ 1.01
2210407C18RikQ6YI28 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
2210407C18RikQ6YI28 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
2210407C18RikQ6YI28 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
2210407C18RikQ6YI28 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
2210407C18RikQ6YI28 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.36■■□□□ 1.01
2210407C18RikQ6YI28 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
2210407C18RikQ6YI28 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
2210407C18RikQ6YI28 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
2210407C18RikQ6YI28 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
2210407C18RikQ6YI28 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
2210407C18RikQ6YI28 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.31■■□□□ 1
2210407C18RikQ6YI28 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
2210407C18RikQ6YI28 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.3■■□□□ 1
2210407C18RikQ6YI28 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
2210407C18RikQ6YI28 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.3■■□□□ 1
2210407C18RikQ6YI28 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.29■■□□□ 1
2210407C18RikQ6YI28 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.29■■□□□ 1
2210407C18RikQ6YI28 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
2210407C18RikQ6YI28 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
2210407C18RikQ6YI28 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
2210407C18RikQ6YI28 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
2210407C18RikQ6YI28 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.26■□□□□ 0.99
2210407C18RikQ6YI28 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.26■□□□□ 0.99
2210407C18RikQ6YI28 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
2210407C18RikQ6YI28 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
2210407C18RikQ6YI28 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
2210407C18RikQ6YI28 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
2210407C18RikQ6YI28 Gm24970-201ENSMUST00000175582 82 ntBASIC21.25■□□□□ 0.99
2210407C18RikQ6YI28 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.25■□□□□ 0.99
2210407C18RikQ6YI28 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
2210407C18RikQ6YI28 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
2210407C18RikQ6YI28 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
2210407C18RikQ6YI28 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
2210407C18RikQ6YI28 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
2210407C18RikQ6YI28 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.23■□□□□ 0.99
2210407C18RikQ6YI28 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
2210407C18RikQ6YI28 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
2210407C18RikQ6YI28 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
2210407C18RikQ6YI28 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.22■□□□□ 0.99
2210407C18RikQ6YI28 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
2210407C18RikQ6YI28 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
2210407C18RikQ6YI28 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
2210407C18RikQ6YI28 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
2210407C18RikQ6YI28 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
2210407C18RikQ6YI28 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
2210407C18RikQ6YI28 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
2210407C18RikQ6YI28 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
2210407C18RikQ6YI28 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
2210407C18RikQ6YI28 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
2210407C18RikQ6YI28 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
2210407C18RikQ6YI28 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
2210407C18RikQ6YI28 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
2210407C18RikQ6YI28 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.17■□□□□ 0.98
2210407C18RikQ6YI28 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
2210407C18RikQ6YI28 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
2210407C18RikQ6YI28 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
2210407C18RikQ6YI28 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.16■□□□□ 0.98
2210407C18RikQ6YI28 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.16■□□□□ 0.98
2210407C18RikQ6YI28 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
2210407C18RikQ6YI28 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
2210407C18RikQ6YI28 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
2210407C18RikQ6YI28 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
2210407C18RikQ6YI28 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.15■□□□□ 0.98
2210407C18RikQ6YI28 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.15■□□□□ 0.98
2210407C18RikQ6YI28 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
2210407C18RikQ6YI28 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
2210407C18RikQ6YI28 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.14■□□□□ 0.97
2210407C18RikQ6YI28 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.14■□□□□ 0.97
2210407C18RikQ6YI28 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.14■□□□□ 0.97
2210407C18RikQ6YI28 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
2210407C18RikQ6YI28 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
2210407C18RikQ6YI28 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
2210407C18RikQ6YI28 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
2210407C18RikQ6YI28 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
2210407C18RikQ6YI28 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms