Protein–RNA interactions for Protein: Q6YI28

2210407C18Rik, EP1, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210407C18RikQ6YI28 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.5■■□□□ 1.03
2210407C18RikQ6YI28 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
2210407C18RikQ6YI28 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
2210407C18RikQ6YI28 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
2210407C18RikQ6YI28 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
2210407C18RikQ6YI28 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
2210407C18RikQ6YI28 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
2210407C18RikQ6YI28 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
2210407C18RikQ6YI28 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
2210407C18RikQ6YI28 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
2210407C18RikQ6YI28 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.45■■□□□ 1.02
2210407C18RikQ6YI28 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
2210407C18RikQ6YI28 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
2210407C18RikQ6YI28 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
2210407C18RikQ6YI28 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
2210407C18RikQ6YI28 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
2210407C18RikQ6YI28 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
2210407C18RikQ6YI28 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
2210407C18RikQ6YI28 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.43■■□□□ 1.02
2210407C18RikQ6YI28 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
2210407C18RikQ6YI28 Gm9397-201ENSMUST00000200125 605 ntBASIC21.4■■□□□ 1.02
2210407C18RikQ6YI28 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
2210407C18RikQ6YI28 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.39■■□□□ 1.02
2210407C18RikQ6YI28 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
2210407C18RikQ6YI28 Gm45855-201ENSMUST00000212546 880 ntBASIC21.38■■□□□ 1.01
2210407C18RikQ6YI28 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
2210407C18RikQ6YI28 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
2210407C18RikQ6YI28 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
2210407C18RikQ6YI28 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
2210407C18RikQ6YI28 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.36■■□□□ 1.01
2210407C18RikQ6YI28 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
2210407C18RikQ6YI28 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
2210407C18RikQ6YI28 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
2210407C18RikQ6YI28 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
2210407C18RikQ6YI28 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
2210407C18RikQ6YI28 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.31■■□□□ 1
2210407C18RikQ6YI28 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
2210407C18RikQ6YI28 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.3■■□□□ 1
2210407C18RikQ6YI28 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
2210407C18RikQ6YI28 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.3■■□□□ 1
2210407C18RikQ6YI28 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.29■■□□□ 1
2210407C18RikQ6YI28 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.29■■□□□ 1
2210407C18RikQ6YI28 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
2210407C18RikQ6YI28 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
2210407C18RikQ6YI28 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
2210407C18RikQ6YI28 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
2210407C18RikQ6YI28 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.26■□□□□ 0.99
2210407C18RikQ6YI28 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.26■□□□□ 0.99
2210407C18RikQ6YI28 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
2210407C18RikQ6YI28 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
2210407C18RikQ6YI28 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
2210407C18RikQ6YI28 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
2210407C18RikQ6YI28 Gm24970-201ENSMUST00000175582 82 ntBASIC21.25■□□□□ 0.99
2210407C18RikQ6YI28 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.25■□□□□ 0.99
2210407C18RikQ6YI28 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
2210407C18RikQ6YI28 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
2210407C18RikQ6YI28 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
2210407C18RikQ6YI28 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
2210407C18RikQ6YI28 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
2210407C18RikQ6YI28 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.23■□□□□ 0.99
2210407C18RikQ6YI28 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
2210407C18RikQ6YI28 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
2210407C18RikQ6YI28 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
2210407C18RikQ6YI28 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.22■□□□□ 0.99
2210407C18RikQ6YI28 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
2210407C18RikQ6YI28 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
2210407C18RikQ6YI28 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
2210407C18RikQ6YI28 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
2210407C18RikQ6YI28 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
2210407C18RikQ6YI28 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
2210407C18RikQ6YI28 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
2210407C18RikQ6YI28 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
2210407C18RikQ6YI28 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
2210407C18RikQ6YI28 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
2210407C18RikQ6YI28 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
2210407C18RikQ6YI28 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
2210407C18RikQ6YI28 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
2210407C18RikQ6YI28 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.17■□□□□ 0.98
2210407C18RikQ6YI28 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
2210407C18RikQ6YI28 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
2210407C18RikQ6YI28 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
2210407C18RikQ6YI28 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.16■□□□□ 0.98
2210407C18RikQ6YI28 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.16■□□□□ 0.98
2210407C18RikQ6YI28 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
2210407C18RikQ6YI28 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
2210407C18RikQ6YI28 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
2210407C18RikQ6YI28 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
2210407C18RikQ6YI28 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.15■□□□□ 0.98
2210407C18RikQ6YI28 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.15■□□□□ 0.98
2210407C18RikQ6YI28 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
2210407C18RikQ6YI28 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
2210407C18RikQ6YI28 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.14■□□□□ 0.97
2210407C18RikQ6YI28 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.14■□□□□ 0.97
2210407C18RikQ6YI28 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.14■□□□□ 0.97
2210407C18RikQ6YI28 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
2210407C18RikQ6YI28 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
2210407C18RikQ6YI28 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
2210407C18RikQ6YI28 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
2210407C18RikQ6YI28 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
2210407C18RikQ6YI28 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms