Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Clcn1Q64347 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC31.29■■■□□ 2.6
Clcn1Q64347 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Clcn1Q64347 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Clcn1Q64347 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Clcn1Q64347 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Clcn1Q64347 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.25■■■□□ 2.59
Clcn1Q64347 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC31.25■■■□□ 2.59
Clcn1Q64347 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Clcn1Q64347 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.24■■■□□ 2.59
Clcn1Q64347 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Clcn1Q64347 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Clcn1Q64347 Gm11599-201ENSMUST00000118720 878 ntBASIC31.23■■■□□ 2.59
Clcn1Q64347 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC31.22■■■□□ 2.59
Clcn1Q64347 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Clcn1Q64347 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.22■■■□□ 2.59
Clcn1Q64347 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Clcn1Q64347 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
Clcn1Q64347 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.58
Clcn1Q64347 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.19■■■□□ 2.58
Clcn1Q64347 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC31.18■■■□□ 2.58
Clcn1Q64347 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Clcn1Q64347 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Clcn1Q64347 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Clcn1Q64347 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Clcn1Q64347 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Clcn1Q64347 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Clcn1Q64347 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC31.11■■■□□ 2.57
Clcn1Q64347 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Clcn1Q64347 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
Clcn1Q64347 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Clcn1Q64347 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
Clcn1Q64347 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Clcn1Q64347 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC31.08■■■□□ 2.57
Clcn1Q64347 Zxda-201ENSMUST00000117281 2621 ntBASIC31.08■■■□□ 2.57
Clcn1Q64347 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
Clcn1Q64347 Gm11175-201ENSMUST00000116172 543 ntBASIC31.07■■■□□ 2.56
Clcn1Q64347 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Clcn1Q64347 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Clcn1Q64347 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC31.05■■■□□ 2.56
Clcn1Q64347 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.05■■■□□ 2.56
Clcn1Q64347 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Clcn1Q64347 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Clcn1Q64347 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Clcn1Q64347 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Clcn1Q64347 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Clcn1Q64347 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Clcn1Q64347 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Clcn1Q64347 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Clcn1Q64347 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Clcn1Q64347 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC31.01■■■□□ 2.55
Clcn1Q64347 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Clcn1Q64347 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Clcn1Q64347 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
Clcn1Q64347 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
Clcn1Q64347 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Clcn1Q64347 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Clcn1Q64347 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Clcn1Q64347 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Clcn1Q64347 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Clcn1Q64347 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Clcn1Q64347 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Clcn1Q64347 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC30.94■■■□□ 2.54
Clcn1Q64347 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
Clcn1Q64347 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC30.93■■■□□ 2.54
Clcn1Q64347 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.93■■■□□ 2.54
Clcn1Q64347 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Clcn1Q64347 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Clcn1Q64347 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Clcn1Q64347 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
Clcn1Q64347 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Clcn1Q64347 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Clcn1Q64347 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.91■■■□□ 2.54
Clcn1Q64347 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC30.89■■■□□ 2.54
Clcn1Q64347 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Clcn1Q64347 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
Clcn1Q64347 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.87■■■□□ 2.53
Clcn1Q64347 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC30.87■■■□□ 2.53
Clcn1Q64347 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
Clcn1Q64347 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
Clcn1Q64347 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Clcn1Q64347 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
Clcn1Q64347 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Clcn1Q64347 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.85■■■□□ 2.53
Clcn1Q64347 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
Clcn1Q64347 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
Clcn1Q64347 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Clcn1Q64347 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Clcn1Q64347 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
Clcn1Q64347 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Clcn1Q64347 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Clcn1Q64347 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Clcn1Q64347 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
Clcn1Q64347 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Clcn1Q64347 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Clcn1Q64347 Mir6538-201ENSMUST00000183713 110 ntBASIC30.76■■■□□ 2.51
Clcn1Q64347 Gm30023-201ENSMUST00000197970 889 ntBASIC30.76■■■□□ 2.51
Clcn1Q64347 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Clcn1Q64347 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Clcn1Q64347 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms