Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.32■■□□□ 1.48
Rai1Q61818 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.32■■□□□ 1.48
Rai1Q61818 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.32■■□□□ 1.48
Rai1Q61818 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rai1Q61818 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.31■■□□□ 1.48
Rai1Q61818 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rai1Q61818 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Rai1Q61818 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
Rai1Q61818 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rai1Q61818 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rai1Q61818 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.28■■□□□ 1.48
Rai1Q61818 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rai1Q61818 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Rai1Q61818 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rai1Q61818 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Rai1Q61818 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rai1Q61818 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rai1Q61818 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.24■■□□□ 1.47
Rai1Q61818 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rai1Q61818 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.23■■□□□ 1.47
Rai1Q61818 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rai1Q61818 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rai1Q61818 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.21■■□□□ 1.47
Rai1Q61818 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rai1Q61818 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Rai1Q61818 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rai1Q61818 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.2■■□□□ 1.46
Rai1Q61818 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rai1Q61818 Mir6538-201ENSMUST00000183713 110 ntBASIC24.19■■□□□ 1.46
Rai1Q61818 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rai1Q61818 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rai1Q61818 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rai1Q61818 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Rai1Q61818 Gm11175-201ENSMUST00000116172 543 ntBASIC24.15■■□□□ 1.46
Rai1Q61818 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.15■■□□□ 1.46
Rai1Q61818 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rai1Q61818 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rai1Q61818 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rai1Q61818 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
Rai1Q61818 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Rai1Q61818 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Rai1Q61818 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Rai1Q61818 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rai1Q61818 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Rai1Q61818 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.13■■□□□ 1.45
Rai1Q61818 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rai1Q61818 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rai1Q61818 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rai1Q61818 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.12■■□□□ 1.45
Rai1Q61818 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Rai1Q61818 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.11■■□□□ 1.45
Rai1Q61818 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
Rai1Q61818 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rai1Q61818 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rai1Q61818 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rai1Q61818 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Rai1Q61818 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.07■■□□□ 1.44
Rai1Q61818 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rai1Q61818 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rai1Q61818 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rai1Q61818 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rai1Q61818 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rai1Q61818 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.06■■□□□ 1.44
Rai1Q61818 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Rai1Q61818 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rai1Q61818 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Rai1Q61818 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rai1Q61818 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Rai1Q61818 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Rai1Q61818 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rai1Q61818 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Rai1Q61818 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rai1Q61818 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.01■■□□□ 1.43
Rai1Q61818 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rai1Q61818 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Rai1Q61818 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24■■□□□ 1.43
Rai1Q61818 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24■■□□□ 1.43
Rai1Q61818 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Rai1Q61818 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.98■■□□□ 1.43
Rai1Q61818 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rai1Q61818 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rai1Q61818 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rai1Q61818 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rai1Q61818 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.92■■□□□ 1.42
Rai1Q61818 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rai1Q61818 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Rai1Q61818 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rai1Q61818 Gm30023-201ENSMUST00000197970 889 ntBASIC23.91■■□□□ 1.42
Rai1Q61818 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rai1Q61818 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rai1Q61818 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rai1Q61818 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.88■■□□□ 1.41
Rai1Q61818 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Rai1Q61818 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rai1Q61818 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rai1Q61818 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rai1Q61818 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Rai1Q61818 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rai1Q61818 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rai1Q61818 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms