Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC37.25■■■■□ 3.55
Arhgef40Q3UPH7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
Arhgef40Q3UPH7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC37.23■■■■□ 3.55
Arhgef40Q3UPH7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC37.23■■■■□ 3.55
Arhgef40Q3UPH7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC37.22■■■■□ 3.55
Arhgef40Q3UPH7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC37.22■■■■□ 3.55
Arhgef40Q3UPH7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC37.2■■■■□ 3.55
Arhgef40Q3UPH7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC37.18■■■■□ 3.54
Arhgef40Q3UPH7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
Arhgef40Q3UPH7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC37.15■■■■□ 3.54
Arhgef40Q3UPH7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC37.15■■■■□ 3.54
Arhgef40Q3UPH7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC37.14■■■■□ 3.54
Arhgef40Q3UPH7 Gm11599-201ENSMUST00000118720 878 ntBASIC37.14■■■■□ 3.54
Arhgef40Q3UPH7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
Arhgef40Q3UPH7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC37.12■■■■□ 3.53
Arhgef40Q3UPH7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
Arhgef40Q3UPH7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
Arhgef40Q3UPH7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC37.11■■■■□ 3.53
Arhgef40Q3UPH7 Mir6538-201ENSMUST00000183713 110 ntBASIC37.1■■■■□ 3.53
Arhgef40Q3UPH7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
Arhgef40Q3UPH7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Arhgef40Q3UPH7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC37.09■■■■□ 3.53
Arhgef40Q3UPH7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
Arhgef40Q3UPH7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.52
Arhgef40Q3UPH7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC37.07■■■■□ 3.52
Arhgef40Q3UPH7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Arhgef40Q3UPH7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC37.06■■■■□ 3.52
Arhgef40Q3UPH7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
Arhgef40Q3UPH7 Gm6345-201ENSMUST00000180378 1691 ntBASIC37.05■■■■□ 3.52
Arhgef40Q3UPH7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
Arhgef40Q3UPH7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
Arhgef40Q3UPH7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
Arhgef40Q3UPH7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC37.04■■■■□ 3.52
Arhgef40Q3UPH7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Arhgef40Q3UPH7 Gm11175-201ENSMUST00000116172 543 ntBASIC37.01■■■■□ 3.52
Arhgef40Q3UPH7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC37.01■■■■□ 3.52
Arhgef40Q3UPH7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC37.01■■■■□ 3.51
Arhgef40Q3UPH7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC37■■■■□ 3.51
Arhgef40Q3UPH7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Arhgef40Q3UPH7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC37■■■■□ 3.51
Arhgef40Q3UPH7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC37■■■■□ 3.51
Arhgef40Q3UPH7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC36.99■■■■□ 3.51
Arhgef40Q3UPH7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC36.98■■■■□ 3.51
Arhgef40Q3UPH7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
Arhgef40Q3UPH7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
Arhgef40Q3UPH7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC36.97■■■■□ 3.51
Arhgef40Q3UPH7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
Arhgef40Q3UPH7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC36.96■■■■□ 3.51
Arhgef40Q3UPH7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
Arhgef40Q3UPH7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC36.95■■■■□ 3.51
Arhgef40Q3UPH7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC36.95■■■■□ 3.5
Arhgef40Q3UPH7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC36.94■■■■□ 3.5
Arhgef40Q3UPH7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
Arhgef40Q3UPH7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
Arhgef40Q3UPH7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC36.92■■■■□ 3.5
Arhgef40Q3UPH7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC36.9■■■■□ 3.5
Arhgef40Q3UPH7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC36.89■■■■□ 3.5
Arhgef40Q3UPH7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC36.87■■■■□ 3.49
Arhgef40Q3UPH7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC36.87■■■■□ 3.49
Arhgef40Q3UPH7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC36.86■■■■□ 3.49
Arhgef40Q3UPH7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC36.85■■■■□ 3.49
Arhgef40Q3UPH7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC36.83■■■■□ 3.49
Arhgef40Q3UPH7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC36.82■■■■□ 3.48
Arhgef40Q3UPH7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC36.82■■■■□ 3.48
Arhgef40Q3UPH7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
Arhgef40Q3UPH7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
Arhgef40Q3UPH7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC36.81■■■■□ 3.48
Arhgef40Q3UPH7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
Arhgef40Q3UPH7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
Arhgef40Q3UPH7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC36.8■■■■□ 3.48
Arhgef40Q3UPH7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
Arhgef40Q3UPH7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC36.76■■■■□ 3.47
Arhgef40Q3UPH7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC36.75■■■■□ 3.47
Arhgef40Q3UPH7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
Arhgef40Q3UPH7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC36.74■■■■□ 3.47
Arhgef40Q3UPH7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC36.74■■■■□ 3.47
Arhgef40Q3UPH7 Gm30023-201ENSMUST00000197970 889 ntBASIC36.73■■■■□ 3.47
Arhgef40Q3UPH7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC36.72■■■■□ 3.47
Arhgef40Q3UPH7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC36.71■■■■□ 3.47
Arhgef40Q3UPH7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC36.71■■■■□ 3.47
Arhgef40Q3UPH7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC36.71■■■■□ 3.47
Arhgef40Q3UPH7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Arhgef40Q3UPH7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC36.7■■■■□ 3.47
Arhgef40Q3UPH7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC36.7■■■■□ 3.47
Arhgef40Q3UPH7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
Arhgef40Q3UPH7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC36.68■■■■□ 3.46
Arhgef40Q3UPH7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC36.67■■■■□ 3.46
Arhgef40Q3UPH7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC36.67■■■■□ 3.46
Arhgef40Q3UPH7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC36.67■■■■□ 3.46
Arhgef40Q3UPH7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
Arhgef40Q3UPH7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC36.65■■■■□ 3.46
Arhgef40Q3UPH7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
Arhgef40Q3UPH7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC36.64■■■■□ 3.46
Arhgef40Q3UPH7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Arhgef40Q3UPH7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Arhgef40Q3UPH7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC36.62■■■■□ 3.45
Arhgef40Q3UPH7 Cap2-205ENSMUST00000225824 1634 ntBASIC36.61■■■■□ 3.45
Arhgef40Q3UPH7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC36.61■■■■□ 3.45
Arhgef40Q3UPH7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC36.61■■■■□ 3.45
Arhgef40Q3UPH7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms