Protein–RNA interactions for Protein: Q3U5C8

Arhgef16, Rho guanine nucleotide exchange factor 16, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef16Q3U5C8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Arhgef16Q3U5C8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.55■■■□□ 2
Arhgef16Q3U5C8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.55■■■□□ 2
Arhgef16Q3U5C8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.54■■■□□ 2
Arhgef16Q3U5C8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Arhgef16Q3U5C8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.53■■■□□ 2
Arhgef16Q3U5C8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Arhgef16Q3U5C8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.52■■■□□ 2
Arhgef16Q3U5C8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Arhgef16Q3U5C8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Arhgef16Q3U5C8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Arhgef16Q3U5C8 Pcf11-205ENSMUST00000208255 1720 ntBASIC27.5■■□□□ 1.99
Arhgef16Q3U5C8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Arhgef16Q3U5C8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Arhgef16Q3U5C8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Arhgef16Q3U5C8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Arhgef16Q3U5C8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Arhgef16Q3U5C8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Arhgef16Q3U5C8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Arhgef16Q3U5C8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Arhgef16Q3U5C8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Arhgef16Q3U5C8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Arhgef16Q3U5C8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Arhgef16Q3U5C8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Arhgef16Q3U5C8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Arhgef16Q3U5C8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Arhgef16Q3U5C8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Arhgef16Q3U5C8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Arhgef16Q3U5C8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.41■■□□□ 1.98
Arhgef16Q3U5C8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Arhgef16Q3U5C8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Arhgef16Q3U5C8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.39■■□□□ 1.98
Arhgef16Q3U5C8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.39■■□□□ 1.98
Arhgef16Q3U5C8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Arhgef16Q3U5C8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.38■■□□□ 1.97
Arhgef16Q3U5C8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Arhgef16Q3U5C8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Arhgef16Q3U5C8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.34■■□□□ 1.97
Arhgef16Q3U5C8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.34■■□□□ 1.97
Arhgef16Q3U5C8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Arhgef16Q3U5C8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
Arhgef16Q3U5C8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Arhgef16Q3U5C8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Arhgef16Q3U5C8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC27.31■■□□□ 1.96
Arhgef16Q3U5C8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Arhgef16Q3U5C8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Arhgef16Q3U5C8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
Arhgef16Q3U5C8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Arhgef16Q3U5C8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Arhgef16Q3U5C8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
Arhgef16Q3U5C8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Arhgef16Q3U5C8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Arhgef16Q3U5C8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Arhgef16Q3U5C8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Arhgef16Q3U5C8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Arhgef16Q3U5C8 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.28■■□□□ 1.96
Arhgef16Q3U5C8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Arhgef16Q3U5C8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Arhgef16Q3U5C8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Arhgef16Q3U5C8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Arhgef16Q3U5C8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Arhgef16Q3U5C8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
Arhgef16Q3U5C8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
Arhgef16Q3U5C8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Arhgef16Q3U5C8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
Arhgef16Q3U5C8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Arhgef16Q3U5C8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Arhgef16Q3U5C8 Gm9397-201ENSMUST00000200125 605 ntBASIC27.22■■□□□ 1.95
Arhgef16Q3U5C8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Arhgef16Q3U5C8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Arhgef16Q3U5C8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.21■■□□□ 1.95
Arhgef16Q3U5C8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
Arhgef16Q3U5C8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.19■■□□□ 1.94
Arhgef16Q3U5C8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Arhgef16Q3U5C8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27.18■■□□□ 1.94
Arhgef16Q3U5C8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.18■■□□□ 1.94
Arhgef16Q3U5C8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC27.18■■□□□ 1.94
Arhgef16Q3U5C8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.17■■□□□ 1.94
Arhgef16Q3U5C8 Gm45855-201ENSMUST00000212546 880 ntBASIC27.16■■□□□ 1.94
Arhgef16Q3U5C8 AC157572.2-201ENSMUST00000226970 908 ntBASIC27.16■■□□□ 1.94
Arhgef16Q3U5C8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.16■■□□□ 1.94
Arhgef16Q3U5C8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC27.15■■□□□ 1.94
Arhgef16Q3U5C8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Arhgef16Q3U5C8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Arhgef16Q3U5C8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Arhgef16Q3U5C8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Arhgef16Q3U5C8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
Arhgef16Q3U5C8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Arhgef16Q3U5C8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Arhgef16Q3U5C8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Arhgef16Q3U5C8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Arhgef16Q3U5C8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Arhgef16Q3U5C8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.12■■□□□ 1.93
Arhgef16Q3U5C8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Arhgef16Q3U5C8 Gm24970-201ENSMUST00000175582 82 ntBASIC27.11■■□□□ 1.93
Arhgef16Q3U5C8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Arhgef16Q3U5C8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Arhgef16Q3U5C8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Arhgef16Q3U5C8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Arhgef16Q3U5C8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms