Protein–RNA interactions for Protein: Q03790

NUP53, Nucleoporin NUP53, yeastyeast

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP53Q03790 tA(AGC)GtA(AGC)G 73 nt7.9□□□□□ -1.14
NUP53Q03790 tA(AGC)HtA(AGC)H 73 nt7.9□□□□□ -1.14
NUP53Q03790 tA(AGC)JtA(AGC)J 73 nt7.9□□□□□ -1.14
NUP53Q03790 tA(AGC)K1tA(AGC)K1 73 nt7.9□□□□□ -1.14
NUP53Q03790 tA(AGC)K2tA(AGC)K2 73 nt7.9□□□□□ -1.14
NUP53Q03790 tA(AGC)LtA(AGC)L 73 nt7.9□□□□□ -1.14
NUP53Q03790 tA(AGC)M1tA(AGC)M1 73 nt7.9□□□□□ -1.14
NUP53Q03790 tA(AGC)M2tA(AGC)M2 73 nt7.9□□□□□ -1.14
NUP53Q03790 TVP23YDR084C 600 nt7.9□□□□□ -1.14
NUP53Q03790 tA(AGC)PtA(AGC)P 73 nt7.9□□□□□ -1.14
NUP53Q03790 YFR036W-AYFR036W-A 651 nt7.9□□□□□ -1.14
NUP53Q03790 CDD1YLR245C 429 nt7.9□□□□□ -1.14
NUP53Q03790 SAM50YNL026W 1455 nt7.89□□□□□ -1.15
NUP53Q03790 VPS62YGR141W 1404 nt7.89□□□□□ -1.15
NUP53Q03790 ASP3-1YLR155C 1089 nt7.89□□□□□ -1.15
NUP53Q03790 ASP3-2YLR157C 1089 nt7.89□□□□□ -1.15
NUP53Q03790 ASP3-3YLR158C 1089 nt7.89□□□□□ -1.15
NUP53Q03790 ASP3-4YLR160C 1089 nt7.89□□□□□ -1.15
NUP53Q03790 NME1NME1 340 nt7.89□□□□□ -1.15
NUP53Q03790 TAT2YOL020W 1779 nt7.89□□□□□ -1.15
NUP53Q03790 YCR025CYCR025C 411 nt7.88□□□□□ -1.15
NUP53Q03790 ADE8YDR408C 645 nt7.88□□□□□ -1.15
NUP53Q03790 THP3YPR045C 1413 nt7.87□□□□□ -1.15
NUP53Q03790 POP2YNR052C 1302 nt7.87□□□□□ -1.15
NUP53Q03790 ABZ2YMR289W 1125 nt7.87□□□□□ -1.15
NUP53Q03790 YDL086WYDL086W 822 nt7.86□□□□□ -1.15
NUP53Q03790 YDR455CYDR455C 309 nt7.86□□□□□ -1.15
NUP53Q03790 NAS2YIL007C 663 nt7.86□□□□□ -1.15
NUP53Q03790 FSH2YMR222C 672 nt7.86□□□□□ -1.15
NUP53Q03790 SWM1YDR260C 513 nt7.85□□□□□ -1.15
NUP53Q03790 KRE1YNL322C 942 nt7.85□□□□□ -1.15
NUP53Q03790 HMG2YLR450W 3138 nt7.85□□□□□ -1.15
NUP53Q03790 ERG13YML126C 1476 nt7.84□□□□□ -1.15
NUP53Q03790 FLX1YIL134W 936 nt7.83□□□□□ -1.16
NUP53Q03790 MAE1YKL029C 2010 nt7.83□□□□□ -1.16
NUP53Q03790 ACO2YJL200C 2370 nt7.82□□□□□ -1.16
NUP53Q03790 YER152W-AYER152W-A 567 nt7.82□□□□□ -1.16
NUP53Q03790 QDR2YIL121W 1629 nt7.81□□□□□ -1.16
NUP53Q03790 ESBP6YNL125C 2022 nt7.81□□□□□ -1.16
NUP53Q03790 TPO4YOR273C 1980 nt7.8□□□□□ -1.16
NUP53Q03790 YGR139WYGR139W 339 nt7.8□□□□□ -1.16
NUP53Q03790 OPI3YJR073C 621 nt7.79□□□□□ -1.16
NUP53Q03790 MAS1YLR163C 1389 nt7.79□□□□□ -1.16
NUP53Q03790 YMR007WYMR007W 381 nt7.78□□□□□ -1.16
NUP53Q03790 LYS20YDL182W 1287 nt7.77□□□□□ -1.17
NUP53Q03790 ENT4YLL038C 744 nt7.77□□□□□ -1.17
NUP53Q03790 PHB2YGR231C 933 nt7.76□□□□□ -1.17
NUP53Q03790 CYC3YAL039C 810 nt7.76□□□□□ -1.17
NUP53Q03790 RCR1YBR005W 642 nt7.76□□□□□ -1.17
NUP53Q03790 AMF1YOR378W 1548 nt7.75□□□□□ -1.17
NUP53Q03790 YIL100C-AYIL100C-A 339 nt7.75□□□□□ -1.17
NUP53Q03790 SPE2YOL052C 1191 nt7.75□□□□□ -1.17
NUP53Q03790 SER2YGR208W 930 nt7.74□□□□□ -1.17
NUP53Q03790 ADH3YMR083W 1128 nt7.74□□□□□ -1.17
NUP53Q03790 BET2YPR176C 978 nt7.74□□□□□ -1.17
NUP53Q03790 INA1YLR413W 2028 nt7.74□□□□□ -1.17
NUP53Q03790 MCM5YLR274W 2328 nt7.74□□□□□ -1.17
NUP53Q03790 RIM8YGL045W 1629 nt7.74□□□□□ -1.17
NUP53Q03790 SAC7YDR389W 1965 nt7.73□□□□□ -1.17
NUP53Q03790 ENO2YHR174W 1314 nt7.73□□□□□ -1.17
NUP53Q03790 LSB6YJL100W 1824 nt7.73□□□□□ -1.17
NUP53Q03790 HTS1YPR033C 1641 nt7.72□□□□□ -1.17
NUP53Q03790 PCP1YGR101W 1041 nt7.72□□□□□ -1.17
NUP53Q03790 AIM1YAL046C 357 nt7.72□□□□□ -1.17
NUP53Q03790 BUD20YLR074C 501 nt7.71□□□□□ -1.18
NUP53Q03790 LEU2YCL018W 1095 nt7.71□□□□□ -1.18
NUP53Q03790 DIG1YPL049C 1359 nt7.71□□□□□ -1.18
NUP53Q03790 YGL114WYGL114W 2178 nt7.7□□□□□ -1.18
NUP53Q03790 TPC1YGR096W 945 nt7.7□□□□□ -1.18
NUP53Q03790 MOB1YIL106W 945 nt7.7□□□□□ -1.18
NUP53Q03790 SRP102YKL154W 735 nt7.7□□□□□ -1.18
NUP53Q03790 YNR064CYNR064C 873 nt7.7□□□□□ -1.18
NUP53Q03790 CCT2YIL142W 1584 nt7.68□□□□□ -1.18
NUP53Q03790 OPI10YOL032W 741 nt7.68□□□□□ -1.18
NUP53Q03790 DTR1YBR180W 1719 nt7.68□□□□□ -1.18
NUP53Q03790 ILV3YJR016C 1758 nt7.68□□□□□ -1.18
NUP53Q03790 URA8YJR103W 1737 nt7.67□□□□□ -1.18
NUP53Q03790 SPT20YOL148C 1815 nt7.66□□□□□ -1.18
NUP53Q03790 ILV2YMR108W 2064 nt7.66□□□□□ -1.18
NUP53Q03790 YKR012CYKR012C 378 nt7.65□□□□□ -1.18
NUP53Q03790 SDS24YBR214W 1584 nt7.65□□□□□ -1.18
NUP53Q03790 RPC82YPR190C 1965 nt7.64□□□□□ -1.19
NUP53Q03790 ENO1YGR254W 1314 nt7.64□□□□□ -1.19
NUP53Q03790 YLR046CYLR046C 813 nt7.64□□□□□ -1.19
NUP53Q03790 YOR343CYOR343C 327 nt7.64□□□□□ -1.19
NUP53Q03790 Q0010Q0010 387 nt7.64□□□□□ -1.19
NUP53Q03790 KEL3YPL263C 1956 nt7.64□□□□□ -1.19
NUP53Q03790 GTB1YDR221W 2109 nt7.63□□□□□ -1.19
NUP53Q03790 NAM8YHR086W 1572 nt7.63□□□□□ -1.19
NUP53Q03790 RPL12BYDR418W 498 nt7.62□□□□□ -1.19
NUP53Q03790 SWT21YNL187W 1074 nt7.62□□□□□ -1.19
NUP53Q03790 YGR210CYGR210C 1236 nt7.61□□□□□ -1.19
NUP53Q03790 PAU21YOR394W 495 nt7.61□□□□□ -1.19
NUP53Q03790 PAU22YPL282C 495 nt7.61□□□□□ -1.19
NUP53Q03790 ERO1YML130C 1692 nt7.6□□□□□ -1.19
NUP53Q03790 VBA3YCL069W 1377 nt7.6□□□□□ -1.19
NUP53Q03790 YOR325WYOR325W 474 nt7.6□□□□□ -1.19
NUP53Q03790 HEM14YER014W 1620 nt7.6□□□□□ -1.19
NUP53Q03790 RFC1YOR217W 2586 nt7.59□□□□□ -1.19
NUP53Q03790 HRA1HRA1 564 nt7.59□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms