Protein–RNA interactions for Protein: P53064

RTF1, RNA polymerase-associated protein RTF1, yeastyeast

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTF1P53064 VPS62YGR141W 1404 nt11.46□□□□□ -0.57
RTF1P53064 NAR1YNL240C 1476 nt11.45□□□□□ -0.58
RTF1P53064 TAT2YOL020W 1779 nt11.44□□□□□ -0.58
RTF1P53064 ACH1YBL015W 1581 nt11.43□□□□□ -0.58
RTF1P53064 IGD1YFR017C 588 nt11.43□□□□□ -0.58
RTF1P53064 ASP3-1YLR155C 1089 nt11.43□□□□□ -0.58
RTF1P53064 ASP3-2YLR157C 1089 nt11.43□□□□□ -0.58
RTF1P53064 ASP3-3YLR158C 1089 nt11.43□□□□□ -0.58
RTF1P53064 ASP3-4YLR160C 1089 nt11.43□□□□□ -0.58
RTF1P53064 YDR455CYDR455C 309 nt11.42□□□□□ -0.58
RTF1P53064 YFR036W-AYFR036W-A 651 nt11.42□□□□□ -0.58
RTF1P53064 RRT8YOL048C 1029 nt11.42□□□□□ -0.58
RTF1P53064 ADE8YDR408C 645 nt11.41□□□□□ -0.58
RTF1P53064 UTP6YDR449C 1323 nt11.39□□□□□ -0.59
RTF1P53064 KRE1YNL322C 942 nt11.39□□□□□ -0.59
RTF1P53064 YDL086WYDL086W 822 nt11.37□□□□□ -0.59
RTF1P53064 VAR1Q0140 1197 nt11.37□□□□□ -0.59
RTF1P53064 RIB1YBL033C 1038 nt11.37□□□□□ -0.59
RTF1P53064 ERG13YML126C 1476 nt11.37□□□□□ -0.59
RTF1P53064 YJR114WYJR114W 393 nt11.34□□□□□ -0.59
RTF1P53064 TVP23YDR084C 600 nt11.33□□□□□ -0.6
RTF1P53064 YIA6YIL006W 1122 nt11.33□□□□□ -0.6
RTF1P53064 PET20YPL159C 762 nt11.32□□□□□ -0.6
RTF1P53064 INA1YLR413W 2028 nt11.31□□□□□ -0.6
RTF1P53064 YCP4YCR004C 744 nt11.31□□□□□ -0.6
RTF1P53064 YCR025CYCR025C 411 nt11.31□□□□□ -0.6
RTF1P53064 tA(AGC)DtA(AGC)D 73 nt11.3□□□□□ -0.6
RTF1P53064 tA(AGC)FtA(AGC)F 73 nt11.3□□□□□ -0.6
RTF1P53064 tA(AGC)GtA(AGC)G 73 nt11.3□□□□□ -0.6
RTF1P53064 tA(AGC)HtA(AGC)H 73 nt11.3□□□□□ -0.6
RTF1P53064 tA(AGC)JtA(AGC)J 73 nt11.3□□□□□ -0.6
RTF1P53064 tA(AGC)K1tA(AGC)K1 73 nt11.3□□□□□ -0.6
RTF1P53064 tA(AGC)K2tA(AGC)K2 73 nt11.3□□□□□ -0.6
RTF1P53064 tA(AGC)LtA(AGC)L 73 nt11.3□□□□□ -0.6
RTF1P53064 tA(AGC)M1tA(AGC)M1 73 nt11.3□□□□□ -0.6
RTF1P53064 tA(AGC)M2tA(AGC)M2 73 nt11.3□□□□□ -0.6
RTF1P53064 tA(AGC)PtA(AGC)P 73 nt11.3□□□□□ -0.6
RTF1P53064 SOD2YHR008C 702 nt11.3□□□□□ -0.6
RTF1P53064 NAS2YIL007C 663 nt11.3□□□□□ -0.6
RTF1P53064 YIL100C-AYIL100C-A 339 nt11.3□□□□□ -0.6
RTF1P53064 YNL067W-AYNL067W-A 147 nt11.3□□□□□ -0.6
RTF1P53064 HMT1YBR034C 1047 nt11.3□□□□□ -0.6
RTF1P53064 IPL1YPL209C 1104 nt11.3□□□□□ -0.6
RTF1P53064 RDN25-1RDN25-1 3396 nt11.3□□□□□ -0.6
RTF1P53064 RDN25-2RDN25-2 3396 nt11.3□□□□□ -0.6
RTF1P53064 ACO2YJL200C 2370 nt11.28□□□□□ -0.6
RTF1P53064 CDD1YLR245C 429 nt11.27□□□□□ -0.61
RTF1P53064 ERG6YML008C 1152 nt11.27□□□□□ -0.61
RTF1P53064 SPE2YOL052C 1191 nt11.27□□□□□ -0.61
RTF1P53064 SAM50YNL026W 1455 nt11.26□□□□□ -0.61
RTF1P53064 YAT1YAR035W 2064 nt11.25□□□□□ -0.61
RTF1P53064 OPI3YJR073C 621 nt11.25□□□□□ -0.61
RTF1P53064 YJR154WYJR154W 1041 nt11.25□□□□□ -0.61
RTF1P53064 AIM1YAL046C 357 nt11.25□□□□□ -0.61
RTF1P53064 THP3YPR045C 1413 nt11.25□□□□□ -0.61
RTF1P53064 YPL071CYPL071C 471 nt11.24□□□□□ -0.61
RTF1P53064 ENO2YHR174W 1314 nt11.24□□□□□ -0.61
RTF1P53064 FLX1YIL134W 936 nt11.21□□□□□ -0.61
RTF1P53064 ENT4YLL038C 744 nt11.21□□□□□ -0.61
RTF1P53064 YHM2YMR241W 945 nt11.21□□□□□ -0.61
RTF1P53064 YCR099CYCR099C 468 nt11.2□□□□□ -0.62
RTF1P53064 SKG1YKR100C 1068 nt11.2□□□□□ -0.62
RTF1P53064 FSH2YMR222C 672 nt11.2□□□□□ -0.62
RTF1P53064 CCT2YIL142W 1584 nt11.19□□□□□ -0.62
RTF1P53064 AMF1YOR378W 1548 nt11.18□□□□□ -0.62
RTF1P53064 FRE6YLL051C 2139 nt11.18□□□□□ -0.62
RTF1P53064 snR78snR78 87 nt11.17□□□□□ -0.62
RTF1P53064 TPC1YGR096W 945 nt11.17□□□□□ -0.62
RTF1P53064 RPC82YPR190C 1965 nt11.17□□□□□ -0.62
RTF1P53064 SAC7YDR389W 1965 nt11.16□□□□□ -0.62
RTF1P53064 ADH3YMR083W 1128 nt11.16□□□□□ -0.62
RTF1P53064 OPI10YOL032W 741 nt11.15□□□□□ -0.62
RTF1P53064 YOR325WYOR325W 474 nt11.15□□□□□ -0.62
RTF1P53064 LYS20YDL182W 1287 nt11.14□□□□□ -0.63
RTF1P53064 YNR064CYNR064C 873 nt11.14□□□□□ -0.63
RTF1P53064 ILV3YJR016C 1758 nt11.13□□□□□ -0.63
RTF1P53064 PCP1YGR101W 1041 nt11.13□□□□□ -0.63
RTF1P53064 PHB2YGR231C 933 nt11.13□□□□□ -0.63
RTF1P53064 MOB1YIL106W 945 nt11.13□□□□□ -0.63
RTF1P53064 YLR046CYLR046C 813 nt11.13□□□□□ -0.63
RTF1P53064 BET2YPR176C 978 nt11.12□□□□□ -0.63
RTF1P53064 LEU2YCL018W 1095 nt11.11□□□□□ -0.63
RTF1P53064 SWM1YDR260C 513 nt11.1□□□□□ -0.63
RTF1P53064 LSB6YJL100W 1824 nt11.09□□□□□ -0.63
RTF1P53064 DIG1YPL049C 1359 nt11.09□□□□□ -0.63
RTF1P53064 CYC3YAL039C 810 nt11.09□□□□□ -0.63
RTF1P53064 POP2YNR052C 1302 nt11.09□□□□□ -0.63
RTF1P53064 YKR012CYKR012C 378 nt11.08□□□□□ -0.64
RTF1P53064 SER2YGR208W 930 nt11.07□□□□□ -0.64
RTF1P53064 YMR007WYMR007W 381 nt11.06□□□□□ -0.64
RTF1P53064 PAB1YER165W 1734 nt11.05□□□□□ -0.64
RTF1P53064 YER152W-AYER152W-A 567 nt11.04□□□□□ -0.64
RTF1P53064 YPL041CYPL041C 624 nt11.04□□□□□ -0.64
RTF1P53064 NAM8YHR086W 1572 nt11.03□□□□□ -0.64
RTF1P53064 ELO1YJL196C 933 nt11.03□□□□□ -0.64
RTF1P53064 YNR068CYNR068C 819 nt11.03□□□□□ -0.64
RTF1P53064 RCR1YBR005W 642 nt11.03□□□□□ -0.64
RTF1P53064 QDR2YIL121W 1629 nt11.02□□□□□ -0.64
RTF1P53064 AI3Q0060 1248 nt11.02□□□□□ -0.65
RTF1P53064 KEL3YPL263C 1956 nt11.02□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 8.9 ms