Protein–RNA interactions for Protein: O54798

Brs3, Bombesin receptor subtype-3, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brs3O54798 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brs3O54798 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brs3O54798 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brs3O54798 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.88■□□□□ 0.77
Brs3O54798 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brs3O54798 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Brs3O54798 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Brs3O54798 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brs3O54798 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Brs3O54798 Gm8503-201ENSMUST00000118131 455 ntBASIC19.85■□□□□ 0.77
Brs3O54798 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Brs3O54798 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.84■□□□□ 0.77
Brs3O54798 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Brs3O54798 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Brs3O54798 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Brs3O54798 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Brs3O54798 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brs3O54798 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Brs3O54798 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brs3O54798 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.81■□□□□ 0.76
Brs3O54798 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brs3O54798 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Brs3O54798 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Brs3O54798 Nkain2-201ENSMUST00000092602 558 ntBASIC19.81■□□□□ 0.76
Brs3O54798 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Brs3O54798 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Brs3O54798 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brs3O54798 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Brs3O54798 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Brs3O54798 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Brs3O54798 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Brs3O54798 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Brs3O54798 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Brs3O54798 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brs3O54798 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Brs3O54798 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brs3O54798 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Brs3O54798 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.78■□□□□ 0.76
Brs3O54798 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Brs3O54798 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.77■□□□□ 0.76
Brs3O54798 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Brs3O54798 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Brs3O54798 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Brs3O54798 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Brs3O54798 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.76■□□□□ 0.75
Brs3O54798 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Brs3O54798 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brs3O54798 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.75■□□□□ 0.75
Brs3O54798 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Brs3O54798 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Brs3O54798 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brs3O54798 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Brs3O54798 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Brs3O54798 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Brs3O54798 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brs3O54798 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.72■□□□□ 0.75
Brs3O54798 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Brs3O54798 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Brs3O54798 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Brs3O54798 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Brs3O54798 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Brs3O54798 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brs3O54798 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Brs3O54798 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.68■□□□□ 0.74
Brs3O54798 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brs3O54798 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brs3O54798 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.67■□□□□ 0.74
Brs3O54798 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Brs3O54798 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Brs3O54798 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.65■□□□□ 0.74
Brs3O54798 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Brs3O54798 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brs3O54798 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Brs3O54798 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brs3O54798 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Brs3O54798 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Brs3O54798 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Brs3O54798 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.62■□□□□ 0.73
Brs3O54798 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Brs3O54798 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brs3O54798 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brs3O54798 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brs3O54798 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Brs3O54798 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.61■□□□□ 0.73
Brs3O54798 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brs3O54798 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brs3O54798 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.61■□□□□ 0.73
Brs3O54798 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Brs3O54798 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brs3O54798 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Brs3O54798 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.6■□□□□ 0.73
Brs3O54798 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Brs3O54798 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Brs3O54798 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Brs3O54798 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brs3O54798 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Brs3O54798 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Brs3O54798 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Brs3O54798 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
Brs3O54798 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms