Protein–RNA interactions for Protein: A0A1B0GSD2

Slc6a21, Transporter, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a21A0A1B0GSD2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Slc6a21A0A1B0GSD2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.14■■□□□ 1.94
Slc6a21A0A1B0GSD2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Slc6a21A0A1B0GSD2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.13■■□□□ 1.93
Slc6a21A0A1B0GSD2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Slc6a21A0A1B0GSD2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.12■■□□□ 1.93
Slc6a21A0A1B0GSD2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Slc6a21A0A1B0GSD2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Slc6a21A0A1B0GSD2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.1■■□□□ 1.93
Slc6a21A0A1B0GSD2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Slc6a21A0A1B0GSD2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.09■■□□□ 1.93
Slc6a21A0A1B0GSD2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Slc6a21A0A1B0GSD2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.08■■□□□ 1.93
Slc6a21A0A1B0GSD2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Slc6a21A0A1B0GSD2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Slc6a21A0A1B0GSD2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Slc6a21A0A1B0GSD2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Slc6a21A0A1B0GSD2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Slc6a21A0A1B0GSD2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Slc6a21A0A1B0GSD2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Slc6a21A0A1B0GSD2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Slc6a21A0A1B0GSD2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Slc6a21A0A1B0GSD2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27■■□□□ 1.91
Slc6a21A0A1B0GSD2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.99■■□□□ 1.91
Slc6a21A0A1B0GSD2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
Slc6a21A0A1B0GSD2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Slc6a21A0A1B0GSD2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Slc6a21A0A1B0GSD2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Slc6a21A0A1B0GSD2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.98■■□□□ 1.91
Slc6a21A0A1B0GSD2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Slc6a21A0A1B0GSD2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.97■■□□□ 1.91
Slc6a21A0A1B0GSD2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Slc6a21A0A1B0GSD2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.96■■□□□ 1.91
Slc6a21A0A1B0GSD2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.96■■□□□ 1.91
Slc6a21A0A1B0GSD2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Slc6a21A0A1B0GSD2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Slc6a21A0A1B0GSD2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Slc6a21A0A1B0GSD2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Slc6a21A0A1B0GSD2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Slc6a21A0A1B0GSD2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Slc6a21A0A1B0GSD2 Gm11175-201ENSMUST00000116172 543 ntBASIC26.92■■□□□ 1.9
Slc6a21A0A1B0GSD2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
Slc6a21A0A1B0GSD2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.91■■□□□ 1.9
Slc6a21A0A1B0GSD2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.91■■□□□ 1.9
Slc6a21A0A1B0GSD2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Slc6a21A0A1B0GSD2 Mir6538-201ENSMUST00000183713 110 ntBASIC26.9■■□□□ 1.9
Slc6a21A0A1B0GSD2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Slc6a21A0A1B0GSD2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Slc6a21A0A1B0GSD2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Slc6a21A0A1B0GSD2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Slc6a21A0A1B0GSD2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.88■■□□□ 1.89
Slc6a21A0A1B0GSD2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
Slc6a21A0A1B0GSD2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Slc6a21A0A1B0GSD2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
Slc6a21A0A1B0GSD2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Slc6a21A0A1B0GSD2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Slc6a21A0A1B0GSD2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Slc6a21A0A1B0GSD2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Slc6a21A0A1B0GSD2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Slc6a21A0A1B0GSD2 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.84■■□□□ 1.89
Slc6a21A0A1B0GSD2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Slc6a21A0A1B0GSD2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Slc6a21A0A1B0GSD2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Slc6a21A0A1B0GSD2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Slc6a21A0A1B0GSD2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Slc6a21A0A1B0GSD2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.81■■□□□ 1.88
Slc6a21A0A1B0GSD2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Slc6a21A0A1B0GSD2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Slc6a21A0A1B0GSD2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
Slc6a21A0A1B0GSD2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Slc6a21A0A1B0GSD2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Slc6a21A0A1B0GSD2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Slc6a21A0A1B0GSD2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Slc6a21A0A1B0GSD2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.76■■□□□ 1.88
Slc6a21A0A1B0GSD2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Slc6a21A0A1B0GSD2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.76■■□□□ 1.87
Slc6a21A0A1B0GSD2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Slc6a21A0A1B0GSD2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.74■■□□□ 1.87
Slc6a21A0A1B0GSD2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Slc6a21A0A1B0GSD2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.72■■□□□ 1.87
Slc6a21A0A1B0GSD2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
Slc6a21A0A1B0GSD2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Slc6a21A0A1B0GSD2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.71■■□□□ 1.87
Slc6a21A0A1B0GSD2 Gm6311-201ENSMUST00000073790 878 ntBASIC26.71■■□□□ 1.87
Slc6a21A0A1B0GSD2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
Slc6a21A0A1B0GSD2 Cap2-205ENSMUST00000225824 1634 ntBASIC26.7■■□□□ 1.86
Slc6a21A0A1B0GSD2 Gm30023-201ENSMUST00000197970 889 ntBASIC26.7■■□□□ 1.86
Slc6a21A0A1B0GSD2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.7■■□□□ 1.86
Slc6a21A0A1B0GSD2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Slc6a21A0A1B0GSD2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Slc6a21A0A1B0GSD2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
Slc6a21A0A1B0GSD2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Slc6a21A0A1B0GSD2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Slc6a21A0A1B0GSD2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Slc6a21A0A1B0GSD2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Slc6a21A0A1B0GSD2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
Slc6a21A0A1B0GSD2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Slc6a21A0A1B0GSD2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Slc6a21A0A1B0GSD2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
Slc6a21A0A1B0GSD2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms